RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
VAC14-208ENST00000566655 IL17AQ16552 155 aa18.05■□□□□ 0.48
VAC14-208ENST00000566655 TBCKQ8TEA7 893 aa18.05■□□□□ 0.48
VAC14-208ENST00000566655 SCN4AP35499 1836 aa18.05■□□□□ 0.48
VAC14-208ENST00000566655 SYCE3A1L190 88 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 C19orf81C9J6K1 198 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 PFKFB1P16118 471 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 PTGDRQ13258 359 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
VAC14-208ENST00000566655 MOB2Q70IA6 237 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 PRPF38AQ8NAV1 312 aaKnown RBP18.04■□□□□ 0.48
VAC14-208ENST00000566655 SLF1Q9BQI6 1058 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 FUCA2Q9BTY2 467 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 GLT8D2Q9H1C3 349 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 TMEM60Q9H2L4 133 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 RPAP3Q9H6T3 665 aaPredicted RBP18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L15C9J2P7 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L13C9JLJ4 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L11C9JVI0 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L18D6R9N7 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L22D6RA61 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L17D6RBQ6 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L19D6RCP7 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L20D6RJB6 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
VAC14-208ENST00000566655 MCM7P33993 719 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L24Q0WX57 530 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 USP17L6PQ6QN14 398 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 LRSAM1Q6UWE0 723 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 NEK8Q86SG6 692 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 CRYGNQ8WXF5 182 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 PPP1R9AQ9ULJ8 1098 aa18.04■□□□□ 0.48
VAC14-208ENST00000566655 PIK3CDO00329 1044 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 LETM1O95202 739 aaPredicted RBP18.03■□□□□ 0.48
VAC14-208ENST00000566655 IREB2P48200 963 aaKnown RBP18.03■□□□□ 0.48
VAC14-208ENST00000566655 USH1GQ495M9 461 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 FERMT2Q96AC1 680 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 CSRNP2Q9H175 543 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 SLC38A10Q9HBR0 1119 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 ADAMTS5Q9UNA0 930 aa18.03■□□□□ 0.48
VAC14-208ENST00000566655 ICAM1P05362 532 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 HMGCS2P54868 508 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 ORC2Q13416 577 aaPredicted RBP18.02■□□□□ 0.47
VAC14-208ENST00000566655 LDLRAD1Q5T700 205 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 ARL6IP4Q66PJ3 421 aaKnown RBP18.02■□□□□ 0.47
VAC14-208ENST00000566655 USP49Q70CQ1 688 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 LDHDQ86WU2 507 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 REPS2Q8NFH8 660 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 CLMNQ96JQ2 1002 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.47
VAC14-208ENST00000566655 TRAF1Q13077 416 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 AP3B2Q13367 1082 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 SPECC1Q5M775 1068 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 CATSPERGQ6ZRH7 1159 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 RRAGCQ9HB90 399 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 CSADQ9Y600 493 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 ABCB11O95342 1321 aa18.01■□□□□ 0.47
VAC14-208ENST00000566655 SPDYE5A6NIY4 337 aa18■□□□□ 0.47
VAC14-208ENST00000566655 FLOT1O75955 427 aa18■□□□□ 0.47
VAC14-208ENST00000566655 ZNF202O95125 648 aa18■□□□□ 0.47
VAC14-208ENST00000566655 NF2P35240 595 aa18■□□□□ 0.47
VAC14-208ENST00000566655 GHRHRQ02643 423 aa18■□□□□ 0.47
VAC14-208ENST00000566655 PPATQ06203 517 aa18■□□□□ 0.47
VAC14-208ENST00000566655 FMR1Q06787 632 aaKnown RBP eCLIP18■□□□□ 0.47
VAC14-208ENST00000566655 CAMK4Q16566 473 aa18■□□□□ 0.47
VAC14-208ENST00000566655 MAP1SQ66K74 1059 aaPredicted RBP18■□□□□ 0.47
VAC14-208ENST00000566655 ANKRD13AQ8IZ07 590 aa18■□□□□ 0.47
VAC14-208ENST00000566655 RBM46Q8TBY0 533 aaKnown RBP18■□□□□ 0.47
VAC14-208ENST00000566655 CLEC4DQ8WXI8 215 aa18■□□□□ 0.47
VAC14-208ENST00000566655 TBC1D5Q92609 795 aa18■□□□□ 0.47
VAC14-208ENST00000566655 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
VAC14-208ENST00000566655 TIGD1Q96MW7 591 aa18■□□□□ 0.47
VAC14-208ENST00000566655 MBOAT7Q96N66 472 aa18■□□□□ 0.47
VAC14-208ENST00000566655 MTMR9Q96QG7 549 aa18■□□□□ 0.47
VAC14-208ENST00000566655 ANO3Q9BYT9 981 aa18■□□□□ 0.47
VAC14-208ENST00000566655 TANGO6Q9C0B7 1094 aa18■□□□□ 0.47
VAC14-208ENST00000566655 ELP3Q9H9T3 547 aa18■□□□□ 0.47
VAC14-208ENST00000566655 TRAF5O00463 557 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 LAD1O00515 517 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 DSG3P32926 999 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 PRPHP41219 470 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 MCTP2Q6DN12 878 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 PPP4R3AQ6IN85 833 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 ERO1BQ86YB8 467 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 ATG4CQ96DT6 458 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 WNK4Q96J92 1243 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 KCNH3Q9ULD8 1083 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 KCNH4Q9UQ05 1017 aa17.99■□□□□ 0.47
VAC14-208ENST00000566655 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
VAC14-208ENST00000566655 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
VAC14-208ENST00000566655 CYP3A7-CYP3A51PA0A087WV96 503 aa17.98■□□□□ 0.47
VAC14-208ENST00000566655 VWA5AO00534 786 aa17.98■□□□□ 0.47
VAC14-208ENST00000566655 SLC37A4O43826 429 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms