RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PEX10O60683 326 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 CNMDO75829 334 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 BCRP11274 1271 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 ADD1P35611 737 aaKnown RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 ERVK-24P63145 666 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 TMEM132BQ14DG7 1078 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 C17orf99Q6UX52 265 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 CPXCR1Q8N123 301 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 SRBD1Q8N5C6 995 aaKnown RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 PIBF1Q8WXW3 757 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 RIOX1Q9H6W3 641 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 JMJD4Q9H9V9 463 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 RAVER2Q9HCJ3 691 aaKnown RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 VAT1LQ9HCJ6 419 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 BTBD7Q9P203 1132 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 RBPJLQ9UBG7 517 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 MORF4L1Q9UBU8 362 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 SEC63Q9UGP8 760 aaKnown RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 ZNF214Q9UL59 606 aaPredicted RBP13.3□□□□□ -0.28
KARS-207ENST00000566560 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
KARS-207ENST00000566560 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
KARS-207ENST00000566560 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 OAZ1P54368 228 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 CCNA1P78396 465 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 QRICH1Q2TAL8 776 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
KARS-207ENST00000566560 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 GPRC5AQ8NFJ5 357 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
KARS-207ENST00000566560 PIGSQ96S52 555 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 SPATC1LQ9H0A9 340 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 CCPG1Q9ULG6 757 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 SMCHD1A6NHR9 2005 aa13.29□□□□□ -0.28
KARS-207ENST00000566560 ZNF236Q9UL36 1845 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 ATP2A1O14983 1001 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 ZBTB5O15062 677 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 CDKL5O76039 1030 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 ICAM1P05362 532 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 IFNAR1P17181 557 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
KARS-207ENST00000566560 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 FUT2Q10981 343 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 ST3GAL1Q11201 340 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 HSCBQ8IWL3 235 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 PHKBQ93100 1093 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 MTMR8Q96EF0 704 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 TMX3Q96JJ7 454 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 PNMA2Q9UL42 364 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 ZNF536O15090 1300 aa13.28□□□□□ -0.28
KARS-207ENST00000566560 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 GPR25O00155 361 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 COPB2P35606 906 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 STAT3P40763 770 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 NTRK3Q16288 839 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 USH1GQ495M9 461 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 RIOX2Q8IUF8 465 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 CCAR1Q8IX12 1150 aaKnown RBP13.27□□□□□ -0.29
KARS-207ENST00000566560 TRIM22Q8IYM9 498 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 AMNQ9BXJ7 453 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 MOV10L1Q9BXT6 1211 aaKnown RBP13.27□□□□□ -0.29
KARS-207ENST00000566560 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
KARS-207ENST00000566560 PORCNQ9H237 461 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
KARS-207ENST00000566560 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
KARS-207ENST00000566560 RBM27Q9P2N5 1060 aaKnown RBP13.27□□□□□ -0.29
KARS-207ENST00000566560 ARIH1Q9Y4X5 557 aaPredicted RBP13.27□□□□□ -0.29
KARS-207ENST00000566560 PNMA6FA0A0J9YX94 578 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 PTPDC1A2A3K4 754 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 K7ELQ4 463 aaPredicted RBP13.26□□□□□ -0.29
KARS-207ENST00000566560 FOXN1O15353 648 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 PPP1R11O60927 126 aaPredicted RBP13.26□□□□□ -0.29
KARS-207ENST00000566560 ALAS1P13196 640 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 ERCC3P19447 782 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
KARS-207ENST00000566560 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
KARS-207ENST00000566560 SP3Q02447 781 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 Q3C1V9 767 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
KARS-207ENST00000566560 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 NCAPG2Q86XI2 1143 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 FBXO11Q86XK2 927 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
KARS-207ENST00000566560 SNX21Q969T3 373 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
KARS-207ENST00000566560 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
KARS-207ENST00000566560 ABCB11O95342 1321 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms