RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ELP1O95163 1332 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 A0A0D9SFI3 127 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 MYADML2A6NDP7 307 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 ASGR1P07306 291 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 FGRP09769 529 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
UBR1-206ENST00000566493 MFAP1P55081 439 aaKnown RBP14.08□□□□□ -0.16
UBR1-206ENST00000566493 SNAP25P60880 206 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 FPGSQ05932 587 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 FAAP100Q0VG06 881 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 CCSAPQ6IQ19 270 aaPredicted RBP14.08□□□□□ -0.16
UBR1-206ENST00000566493 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 UPF3AQ9H1J1 476 aaKnown RBP14.08□□□□□ -0.16
UBR1-206ENST00000566493 COL6A3P12111 3177 aa14.08□□□□□ -0.16
UBR1-206ENST00000566493 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
UBR1-206ENST00000566493 SOWAHBA6NEL2 793 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 DLL1O00548 723 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 ADCY6O43306 1168 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 GABBR2O75899 941 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
UBR1-206ENST00000566493 NOVP48745 357 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
UBR1-206ENST00000566493 NMIQ13287 307 aaPredicted RBP14.07□□□□□ -0.16
UBR1-206ENST00000566493 B4GALNT3Q6L9W6 998 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 NSMFQ6X4W1 530 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 RNPC3Q96LT9 517 aaKnown RBP14.07□□□□□ -0.16
UBR1-206ENST00000566493 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 AP5M1Q9H0R1 490 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 TCP11L1Q9NUJ3 509 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 CCDC171Q6TFL3 1326 aa14.07□□□□□ -0.16
UBR1-206ENST00000566493 TLR3O15455 904 aaKnown RBP14.06□□□□□ -0.16
UBR1-206ENST00000566493 TIMP1P01033 207 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 ICAM1P05362 532 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
UBR1-206ENST00000566493 ITGB8P26012 769 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 HAND2P61296 217 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 MUM1L1Q5H9M0 696 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 SYDE2Q5VT97 1194 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 RASGRP2Q7LDG7 609 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 YTHDC1Q96MU7 727 aaKnown RBP14.06□□□□□ -0.16
UBR1-206ENST00000566493 KATNBL1Q9H079 304 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 RANBP17Q9H2T7 1088 aaKnown RBP14.06□□□□□ -0.16
UBR1-206ENST00000566493 RNF41Q9H4P4 317 aaPredicted RBP14.06□□□□□ -0.16
UBR1-206ENST00000566493 GPCPD1Q9NPB8 672 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 CYP39A1Q9NYL5 469 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
UBR1-206ENST00000566493 ZMYM6O95789 1325 aa14.06□□□□□ -0.16
UBR1-206ENST00000566493 ARVCFO00192 962 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 ZEB2O60315 1214 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 SLC16A2P36021 539 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 CDK7P50613 346 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
UBR1-206ENST00000566493 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 IQSEC1Q6DN90 963 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 TTBK2Q6IQ55 1244 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 BTNL9Q6UXG8 535 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 ZNF589Q86UQ0 364 aaPredicted RBP14.05□□□□□ -0.16
UBR1-206ENST00000566493 TTC14Q96N46 770 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 GUCD1Q96NT3 240 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 PNMA2Q9UL42 364 aa14.05□□□□□ -0.16
UBR1-206ENST00000566493 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
UBR1-206ENST00000566493 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.04□□□□□ -0.16
UBR1-206ENST00000566493 ZNF213O14771 459 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 DYNC1LI2O43237 492 aaPredicted RBP14.04□□□□□ -0.16
UBR1-206ENST00000566493 CABYRO75952 493 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 SDSP20132 328 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 EPHB4P54760 987 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 NKX3-2P78367 333 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 BEX3Q00994 111 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
UBR1-206ENST00000566493 MFSD5Q6N075 450 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 EEPD1Q7L9B9 569 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 TLK2Q86UE8 772 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 CHD1LQ86WJ1 897 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 SMC5Q8IY18 1101 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 SEMA6BQ9H3T3 888 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 VTA1Q9NP79 307 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 TBX21Q9UL17 535 aa14.04□□□□□ -0.16
UBR1-206ENST00000566493 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
UBR1-206ENST00000566493 PTPDC1A2A3K4 754 aa14.03□□□□□ -0.16
UBR1-206ENST00000566493 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBR1-206ENST00000566493 BAATQ14032 418 aaPredicted RBP14.03□□□□□ -0.16
UBR1-206ENST00000566493 KIAA1211Q6ZU35 1233 aa14.03□□□□□ -0.16
UBR1-206ENST00000566493 FBXO16Q8IX29 292 aaPredicted RBP14.03□□□□□ -0.16
UBR1-206ENST00000566493 TMEM199Q8N511 208 aa14.03□□□□□ -0.16
UBR1-206ENST00000566493 ESR2Q92731 530 aa14.03□□□□□ -0.16
UBR1-206ENST00000566493 MPHOSPH6Q99547 160 aaKnown RBP14.03□□□□□ -0.16
UBR1-206ENST00000566493 DIAPH3Q9NSV4 1193 aa14.03□□□□□ -0.16
UBR1-206ENST00000566493 GNEQ9Y223 722 aaKnown RBP14.03□□□□□ -0.16
UBR1-206ENST00000566493 Q9Y3F1 56 aa14.03□□□□□ -0.16
UBR1-206ENST00000566493 ASTN1O14525 1302 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.02□□□□□ -0.17
UBR1-206ENST00000566493 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.02□□□□□ -0.17
UBR1-206ENST00000566493 HIP1O00291 1037 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 CTAGE5O15320 804 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 PDHBP11177 359 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 SMPD1P17405 629 aa14.02□□□□□ -0.17
UBR1-206ENST00000566493 NT5C2P49902 561 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms