RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 STARD7Q9NQZ5 370 aa23.71■■□□□ 1.39
CLN6-207ENST00000566347 CTNNA3Q9UI47 895 aa23.71■■□□□ 1.39
CLN6-207ENST00000566347 C6orf222P0C671 652 aaPredicted RBP23.7■■□□□ 1.38
CLN6-207ENST00000566347 GJA9P57773 515 aa23.7■■□□□ 1.38
CLN6-207ENST00000566347 ZNF543Q08ER8 600 aa23.7■■□□□ 1.38
CLN6-207ENST00000566347 CCSAPQ6IQ19 270 aaPredicted RBP23.7■■□□□ 1.38
CLN6-207ENST00000566347 NSMFQ6X4W1 530 aa23.7■■□□□ 1.38
CLN6-207ENST00000566347 IQCA1Q86XH1 822 aa23.7■■□□□ 1.38
CLN6-207ENST00000566347 CLTBP09497 229 aa23.69■■□□□ 1.38
CLN6-207ENST00000566347 SNHG28P0DPA3 235 aa23.69■■□□□ 1.38
CLN6-207ENST00000566347 IMMTQ16891 758 aaKnown RBP23.69■■□□□ 1.38
CLN6-207ENST00000566347 GPATCH4Q5T3I0 446 aaKnown RBP23.69■■□□□ 1.38
CLN6-207ENST00000566347 ELP1O95163 1332 aa23.68■■□□□ 1.38
CLN6-207ENST00000566347 TRIM43BA6NCK2 446 aa23.68■■□□□ 1.38
CLN6-207ENST00000566347 ADCY6O43306 1168 aa23.68■■□□□ 1.38
CLN6-207ENST00000566347 PQBP1O60828 265 aaKnown RBP23.68■■□□□ 1.38
CLN6-207ENST00000566347 TRIM43Q96BQ3 446 aaPredicted RBP23.68■■□□□ 1.38
CLN6-207ENST00000566347 GLT1D1Q96MS3 346 aa23.68■■□□□ 1.38
CLN6-207ENST00000566347 TOX2Q96NM4 488 aa23.68■■□□□ 1.38
CLN6-207ENST00000566347 ZKSCAN3Q9BRR0 538 aa23.68■■□□□ 1.38
CLN6-207ENST00000566347 ADD3Q9UEY8 706 aaKnown RBP23.68■■□□□ 1.38
CLN6-207ENST00000566347 MYADML2A6NDP7 307 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 KDM4AO75164 1064 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 NKX3-2P78367 333 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 TNFAIP2Q03169 654 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 GNASQ5JWF2 1037 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 TTC22Q5TAA0 569 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 ANKRD33Q7Z3H0 272 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 SH3RF1Q7Z6J0 888 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 BADQ92934 168 aa23.67■■□□□ 1.38
CLN6-207ENST00000566347 ASTN1O14525 1302 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 MROH7Q68CQ1 1323 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 WDR19Q8NEZ3 1342 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 LOC102724159A0A0B4J2E5 919 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 DCDC2CA8MYV0 355 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 ASGR1P07306 291 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 PDE4AP27815 886 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 PWP2Q15269 919 aaKnown RBP23.66■■□□□ 1.38
CLN6-207ENST00000566347 NOL8Q76FK4 1167 aaKnown RBP23.66■■□□□ 1.38
CLN6-207ENST00000566347 KRT23Q9C075 422 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 CNNM2Q9H8M5 875 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 LRRC37A2A6NM11 1700 aa23.66■■□□□ 1.38
CLN6-207ENST00000566347 RAD50Q92878 1312 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 LCTP09848 1927 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 B4E1Z4 1266 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 KIAA0355O15063 1070 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 BAATQ14032 418 aaPredicted RBP23.65■■□□□ 1.38
CLN6-207ENST00000566347 DEFB123Q8N688 67 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 MORC4Q8TE76 937 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 ANKS1AQ92625 1134 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 ZSCAN10Q96SZ4 725 aaPredicted RBP23.65■■□□□ 1.38
CLN6-207ENST00000566347 KAT14Q9H8E8 782 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 VTA1Q9NP79 307 aa23.65■■□□□ 1.38
CLN6-207ENST00000566347 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.64■■□□□ 1.37
CLN6-207ENST00000566347 NFIBO00712 420 aa23.64■■□□□ 1.37
CLN6-207ENST00000566347 GSPT1P15170 499 aaKnown RBP23.64■■□□□ 1.37
CLN6-207ENST00000566347 IQSEC1Q6DN90 963 aa23.64■■□□□ 1.37
CLN6-207ENST00000566347 VTI1AQ96AJ9 217 aa23.64■■□□□ 1.37
CLN6-207ENST00000566347 TMEM39AQ9NV64 488 aa23.64■■□□□ 1.37
CLN6-207ENST00000566347 GNEQ9Y223 722 aaKnown RBP23.64■■□□□ 1.37
CLN6-207ENST00000566347 A0A0U1RQG5 324 aaPredicted RBP23.63■■□□□ 1.37
CLN6-207ENST00000566347 PTPDC1A2A3K4 754 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 RAG1P15918 1043 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 IRX5P78411 483 aaPredicted RBP23.63■■□□□ 1.37
CLN6-207ENST00000566347 TLK2Q86UE8 772 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 FBXO16Q8IX29 292 aaPredicted RBP23.63■■□□□ 1.37
CLN6-207ENST00000566347 RUFY2Q8WXA3 655 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 AP5M1Q9H0R1 490 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 ZSWIM5Q9P217 1185 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 Q9Y3F1 56 aa23.63■■□□□ 1.37
CLN6-207ENST00000566347 CTAGE5O15320 804 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 GOLGA8HP0CJ92 632 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 ALDH5A1P51649 535 aaPredicted RBP23.62■■□□□ 1.37
CLN6-207ENST00000566347 FAAP100Q0VG06 881 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 TAPT1Q6NXT6 567 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 RNF207Q6ZRF8 634 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 ENAHQ8N8S7 591 aaPredicted RBP23.62■■□□□ 1.37
CLN6-207ENST00000566347 CLEC4DQ8WXI8 215 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 MPHOSPH6Q99547 160 aaKnown RBP23.62■■□□□ 1.37
CLN6-207ENST00000566347 UBAC1Q9BSL1 405 aa23.62■■□□□ 1.37
CLN6-207ENST00000566347 LAMA2P24043 3122 aaKnown RBP23.62■■□□□ 1.37
CLN6-207ENST00000566347 TNKSO95271 1327 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 ZEB2O60315 1214 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 CABYRO75952 493 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 SMPD1P17405 629 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 CDK7P50613 346 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 IRX6P78412 446 aaPredicted RBP23.61■■□□□ 1.37
CLN6-207ENST00000566347 SHHQ15465 462 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 FSCN1Q16658 493 aaKnown RBP23.61■■□□□ 1.37
CLN6-207ENST00000566347 ASPRV1Q53RT3 343 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 EEPD1Q7L9B9 569 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 PURBQ96QR8 312 aaKnown RBP23.61■■□□□ 1.37
CLN6-207ENST00000566347 IL25Q9H293 177 aa23.61■■□□□ 1.37
CLN6-207ENST00000566347 DDX49Q9Y6V7 483 aaKnown RBP23.61■■□□□ 1.37
CLN6-207ENST00000566347 ARVCFO00192 962 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 ITGB8P26012 769 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 CALML3P27482 149 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 BEX3Q00994 111 aa23.6■■□□□ 1.37
CLN6-207ENST00000566347 SLC30A10Q6XR72 485 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms