RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ACAD9Q9H845 621 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 A1CFQ9NQ94 594 aaKnown RBP15.94■□□□□ 0.14
COMMD4-214ENST00000566230 ECHDC1Q9NTX5 307 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 PRRC2BQ5JSZ5 2229 aaKnown RBP15.93■□□□□ 0.14
COMMD4-214ENST00000566230 TMEM232C9JQI7 657 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 M0R2C6 588 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 RNF113AO15541 343 aaKnown RBP15.93■□□□□ 0.14
COMMD4-214ENST00000566230 GPAA1O43292 621 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 SMPD1P17405 629 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 IGFBP4P22692 258 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 MRPS5P82675 430 aaKnown RBP15.93■□□□□ 0.14
COMMD4-214ENST00000566230 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
COMMD4-214ENST00000566230 TMEM63BQ5T3F8 832 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
COMMD4-214ENST00000566230 NEDD1Q8NHV4 660 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 ADAMTS19Q8TE59 1207 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 NOC4LQ9BVI4 516 aaKnown RBP15.93■□□□□ 0.14
COMMD4-214ENST00000566230 TRPV6Q9H1D0 765 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 PDGFCQ9NRA1 345 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 RNF146Q9NTX7 359 aa15.93■□□□□ 0.14
COMMD4-214ENST00000566230 PLIN4Q96Q06 1357 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 CABYRO75952 493 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 FDX1P10109 184 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 TDO2P48775 406 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 CCL23P55773 120 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 TAPT1Q6NXT6 567 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 OTOP2Q7RTS6 562 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 TLK2Q86UE8 772 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 SLC28A3Q9HAS3 691 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 PCDHB15Q9Y5E8 787 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 SCN5AQ14524 2016 aa15.92■□□□□ 0.14
COMMD4-214ENST00000566230 ASB14A6NK59 587 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
COMMD4-214ENST00000566230 DYNC1LI2O43237 492 aaPredicted RBP15.91■□□□□ 0.14
COMMD4-214ENST00000566230 B4GALT4O60513 344 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 APPP05067 770 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 MYOGP15173 224 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 RABGGTBP53611 331 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 SNAP25P60880 206 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 PSMC6P62333 389 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 TSHZ3Q63HK5 1081 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 IFNL3Q8IZI9 196 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 STAG1Q8WVM7 1258 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 AP5M1Q9H0R1 490 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 MTIF3Q9H2K0 278 aaKnown RBP15.91■□□□□ 0.14
COMMD4-214ENST00000566230 ZNF287Q9HBT7 754 aa15.91■□□□□ 0.14
COMMD4-214ENST00000566230 ALAS1P13196 640 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 GNAT2P19087 354 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 MCCP23508 829 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 STAT2P52630 851 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 TFAP4Q01664 338 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 TKFCQ3LXA3 575 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 IQSEC1Q6DN90 963 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 FAM160B2Q86V87 743 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 CHURC1Q8WUH1 139 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 GMCL1Q96IK5 515 aa15.9■□□□□ 0.14
COMMD4-214ENST00000566230 PURBQ96QR8 312 aaKnown RBP15.9■□□□□ 0.14
COMMD4-214ENST00000566230 UHRF1Q96T88 793 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-214ENST00000566230 SEC62Q99442 399 aaKnown RBP15.9■□□□□ 0.14
COMMD4-214ENST00000566230 PLA2G6O60733 806 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 ZFYP08048 801 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-214ENST00000566230 TSPY3P0CV98 308 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 TSPY8P0CW00 308 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 FBXO16Q8IX29 292 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-214ENST00000566230 SCLYQ96I15 445 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 SEZ6LQ9BYH1 1024 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 CYP39A1Q9NYL5 469 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
COMMD4-214ENST00000566230 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
COMMD4-214ENST00000566230 BMP1P13497 986 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 SLC1A4P43007 532 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 RCSD1Q6JBY9 416 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 KCTD1Q719H9 257 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 RASGRP2Q7LDG7 609 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 RPUSD2Q8IZ73 545 aaKnown RBP15.88■□□□□ 0.13
COMMD4-214ENST00000566230 MORC4Q8TE76 937 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 NECAB3Q96P71 396 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-214ENST00000566230 PRR12Q9ULL5 1215 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 Q9Y3F1 56 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 PCDHA11Q9Y5I1 949 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 TET1Q8NFU7 2136 aa15.88■□□□□ 0.13
COMMD4-214ENST00000566230 XIRP2A4UGR9 3374 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 ZEB2O60315 1214 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 PDE4BQ07343 736 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 PPARAQ07869 468 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 IKQ13123 557 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-214ENST00000566230 TTLL4Q14679 1199 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 PPP2R2DQ66LE6 453 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 ALDH8A1Q9H2A2 487 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-214ENST00000566230 INCENPQ9NQS7 918 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 IL17RBQ9NRM6 502 aa15.87■□□□□ 0.13
COMMD4-214ENST00000566230 SCN10AQ9Y5Y9 1956 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 NMT2O60551 498 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 CYP2C9P11712 490 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms