RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 MORF4L1Q9UBU8 362 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 PLXNA1Q9UIW2 1896 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
SPG7-213ENST00000566221 DTNBO60941 627 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 XBP1P17861 261 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 COPB2P35606 906 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 STAT3P40763 770 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 ERVK-9P63128 1117 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 ERVK-24P63145 666 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 ANKRD13CQ8N6S4 541 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
SPG7-213ENST00000566221 AGBL1Q96MI9 1066 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 MCOLN1Q9GZU1 580 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 PCDHA1Q9Y5I3 950 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 DOCK3Q8IZD9 2030 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 LCTP09848 1927 aa17.06■□□□□ 0.32
SPG7-213ENST00000566221 STXBP3O00186 592 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 NAPAP54920 295 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 CCNA1P78396 465 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 RIOX2Q8IUF8 465 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 GPRC5AQ8NFJ5 357 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 SAGE1Q9NXZ1 904 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 MYH15Q9Y2K3 1946 aa17.05■□□□□ 0.32
SPG7-213ENST00000566221 SLC25A27O95847 323 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 BCRP11274 1271 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 ALAS1P13196 640 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 PDCP20941 246 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 TRIM29Q14134 588 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 SHCBP1Q8NEM2 672 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 COA7Q96BR5 231 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 AIFM3Q96NN9 605 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 MOV10L1Q9BXT6 1211 aaKnown RBP17.04■□□□□ 0.32
SPG7-213ENST00000566221 RNF146Q9NTX7 359 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 RNF186Q9NXI6 227 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 CPA4Q9UI42 421 aa17.04■□□□□ 0.32
SPG7-213ENST00000566221 MRPL11Q9Y3B7 192 aaKnown RBP17.04■□□□□ 0.32
SPG7-213ENST00000566221 ZSWIM8A7E2V4 1837 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 PEX10O60683 326 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 C17orf99Q6UX52 265 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 C8orf76Q96K31 380 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
SPG7-213ENST00000566221 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 VPS54Q9P1Q0 977 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 FBXO40Q9UH90 709 aa17.03■□□□□ 0.32
SPG7-213ENST00000566221 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 TRPA1O75762 1119 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 TAL1P17542 331 aaPredicted RBP17.02■□□□□ 0.32
SPG7-213ENST00000566221 TYW1BQ6NUM6 668 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 RGS22Q8NE09 1264 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 TRERF1Q96PN7 1200 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 GLT8D2Q9H1C3 349 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 MROH8Q9H579 483 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 ACAD9Q9H845 621 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
SPG7-213ENST00000566221 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.31
SPG7-213ENST00000566221 ERCC3P19447 782 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 CALML3P27482 149 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 ADCY7P51828 1080 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 FOSBP53539 338 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 Q3C1V9 767 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 LARP1BQ659C4 914 aaKnown RBP17.01■□□□□ 0.31
SPG7-213ENST00000566221 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPG7-213ENST00000566221 NCAPG2Q86XI2 1143 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 MCF2L2Q86YR7 1114 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 TEX2Q8IWB9 1127 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 CCAR1Q8IX12 1150 aaKnown RBP17.01■□□□□ 0.31
SPG7-213ENST00000566221 CUL5Q93034 780 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 PHF20Q9BVI0 1012 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 MAF1Q9H063 256 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 ZMYND12Q9H0C1 365 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 C6orf50Q9HD87 102 aa17.01■□□□□ 0.31
SPG7-213ENST00000566221 TBC1D8O95759 1140 aa17■□□□□ 0.31
SPG7-213ENST00000566221 GNA11P29992 359 aa17■□□□□ 0.31
SPG7-213ENST00000566221 MAPK4P31152 587 aa17■□□□□ 0.31
SPG7-213ENST00000566221 NLRP5P59047 1200 aa17■□□□□ 0.31
SPG7-213ENST00000566221 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
SPG7-213ENST00000566221 KRT40Q6A162 431 aa17■□□□□ 0.31
SPG7-213ENST00000566221 GALNT17Q6IS24 598 aa17■□□□□ 0.31
SPG7-213ENST00000566221 SAMD3Q8N6K7 520 aa17■□□□□ 0.31
SPG7-213ENST00000566221 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
SPG7-213ENST00000566221 BICD2Q8TD16 824 aa17■□□□□ 0.31
SPG7-213ENST00000566221 CLEC4DQ8WXI8 215 aa17■□□□□ 0.31
SPG7-213ENST00000566221 SHISA4Q96DD7 197 aa17■□□□□ 0.31
SPG7-213ENST00000566221 PORCNQ9H237 461 aa17■□□□□ 0.31
SPG7-213ENST00000566221 PSTPIP2Q9H939 334 aa17■□□□□ 0.31
SPG7-213ENST00000566221 BRMS1Q9HCU9 246 aa17■□□□□ 0.31
SPG7-213ENST00000566221 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
SPG7-213ENST00000566221 PFASO15067 1338 aa16.99■□□□□ 0.31
SPG7-213ENST00000566221 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
SPG7-213ENST00000566221 H3BQV1 296 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms