RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
FANCA-219ENST00000566133 GUCD1Q96NT3 240 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 TMEM47Q9BQJ4 181 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 KATNBL1Q9H079 304 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 SEMA6BQ9H3T3 888 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 PLXNA1Q9UIW2 1896 aa13.27□□□□□ -0.29
FANCA-219ENST00000566133 ARVCFO00192 962 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 DYNC1LI2O43237 492 aaPredicted RBP13.26□□□□□ -0.29
FANCA-219ENST00000566133 TIMP1P01033 207 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 TOP1P11387 765 aaKnown RBP13.26□□□□□ -0.29
FANCA-219ENST00000566133 HAND2P61296 217 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 BEX3Q00994 111 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 FPGSQ05932 587 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 IQSEC1Q6DN90 963 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 BTNL9Q6UXG8 535 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 EEPD1Q7L9B9 569 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
FANCA-219ENST00000566133 TTC14Q96N46 770 aa13.26□□□□□ -0.29
FANCA-219ENST00000566133 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
FANCA-219ENST00000566133 UPF3AQ9H1J1 476 aaKnown RBP13.26□□□□□ -0.29
FANCA-219ENST00000566133 DDX49Q9Y6V7 483 aaKnown RBP13.26□□□□□ -0.29
FANCA-219ENST00000566133 MROH7Q68CQ1 1323 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 FRMPD2Q68DX3 1309 aaPredicted RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 A0A0U1RQG5 324 aaPredicted RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 CTAGE5O15320 804 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 ICAM1P05362 532 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 SDSP20132 328 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 SMAD3P84022 425 aaKnown RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 AAMPQ13685 434 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 KIAA1211Q6ZU35 1233 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 CDX2Q99626 313 aaPredicted RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 AP5M1Q9H0R1 490 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 RANBP17Q9H2T7 1088 aaKnown RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 PDGFCQ9NRA1 345 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 CYP39A1Q9NYL5 469 aa13.25□□□□□ -0.29
FANCA-219ENST00000566133 GNEQ9Y223 722 aaKnown RBP13.25□□□□□ -0.29
FANCA-219ENST00000566133 LAMA3Q16787 3333 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
FANCA-219ENST00000566133 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
FANCA-219ENST00000566133 ZEB2O60315 1214 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 IGHDP01880 384 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 SMPD1P17405 629 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 NKX3-2P78367 333 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 AKNAD1Q5T1N1 836 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 TAPT1Q6NXT6 567 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
FANCA-219ENST00000566133 ASTN1O14525 1302 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 CCDC171Q6TFL3 1326 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 PTPDC1A2A3K4 754 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 ZNF213O14771 459 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 TLR3O15455 904 aaKnown RBP13.23□□□□□ -0.29
FANCA-219ENST00000566133 PTGS1P23219 599 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
FANCA-219ENST00000566133 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
FANCA-219ENST00000566133 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
FANCA-219ENST00000566133 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 Q9Y3F1 56 aa13.23□□□□□ -0.29
FANCA-219ENST00000566133 NFIBO00712 420 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 CABYRO75952 493 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 PDHBP11177 359 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
FANCA-219ENST00000566133 NUCB1Q02818 461 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.292e-11■■■■□ 26.2
FANCA-219ENST00000566133 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
FANCA-219ENST00000566133 C16orf59Q7L2K0 433 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 FBXO16Q8IX29 292 aaPredicted RBP13.22□□□□□ -0.29
FANCA-219ENST00000566133 FAM126BQ8IXS8 530 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 MORC4Q8TE76 937 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.22□□□□□ -0.295e-18■■■□□ 14.7
FANCA-219ENST00000566133 ZKSCAN3Q9BRR0 538 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 PPP1R12CQ9BZL4 782 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 TTYH1Q9H313 450 aaPredicted RBP13.22□□□□□ -0.29
FANCA-219ENST00000566133 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
FANCA-219ENST00000566133 RNF41Q9H4P4 317 aaPredicted RBP13.22□□□□□ -0.29
FANCA-219ENST00000566133 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 CD4P01730 458 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 ACRP10323 421 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 CSF2RAP15509 400 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 CALML3P27482 149 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 ALDH5A1P51649 535 aaPredicted RBP13.21□□□□□ -0.29
FANCA-219ENST00000566133 ZNF543Q08ER8 600 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 TMEM240Q5SV17 173 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
FANCA-219ENST00000566133 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms