RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 GTF3C2Q8WUA4 911 aaPredicted RBP17.63■□□□□ 0.41
KNOP1-203ENST00000565844 WASF1Q92558 559 aa17.63■□□□□ 0.41
KNOP1-203ENST00000565844 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
KNOP1-203ENST00000565844 PPP1R11O60927 126 aaPredicted RBP17.62■□□□□ 0.41
KNOP1-203ENST00000565844 EN2P19622 333 aaPredicted RBP17.62■□□□□ 0.41
KNOP1-203ENST00000565844 GJB2P29033 226 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 PKN1Q16512 942 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 PFKFB3Q16875 520 aaPredicted RBP17.62■□□□□ 0.41
KNOP1-203ENST00000565844 POTEEQ6S8J3 1075 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 FBXO11Q86XK2 927 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 FAM184AQ8NB25 1140 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 REPS2Q8NFH8 660 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 ARMC5Q96C12 935 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 TRIM47Q96LD4 638 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 AMNQ9BXJ7 453 aa17.62■□□□□ 0.41
KNOP1-203ENST00000565844 RAVER2Q9HCJ3 691 aaKnown RBP17.62■□□□□ 0.41
KNOP1-203ENST00000565844 ICAM1P05362 532 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 GCLCP48506 637 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-203ENST00000565844 OAZ1P54368 228 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 PLS1Q14651 629 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 USH1GQ495M9 461 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 WWC2Q6AWC2 1192 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 GPKOWQ92917 476 aaPredicted RBP eCLIP17.61■□□□□ 0.41
KNOP1-203ENST00000565844 AIFM3Q96NN9 605 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 BTBD7Q9P203 1132 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 ZNF214Q9UL59 606 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-203ENST00000565844 CCPG1Q9ULG6 757 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 KIF3AQ9Y496 699 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 SMCHD1A6NHR9 2005 aa17.61■□□□□ 0.41
KNOP1-203ENST00000565844 ZNF536O15090 1300 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 PEX10O60683 326 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 FOSBP53539 338 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 SNRNP48Q6IEG0 339 aaKnown RBP17.6■□□□□ 0.41
KNOP1-203ENST00000565844 ZNF333Q96JL9 665 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 AGBL1Q96MI9 1066 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 RBPJLQ9UBG7 517 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 RABGAP1Q9Y3P9 1069 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
KNOP1-203ENST00000565844 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 ATP2A1O14983 1001 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 CNMDO75829 334 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 TAL1P17542 331 aaPredicted RBP17.59■□□□□ 0.41
KNOP1-203ENST00000565844 TRAF1Q13077 416 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
KNOP1-203ENST00000565844 COA7Q96BR5 231 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
KNOP1-203ENST00000565844 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
KNOP1-203ENST00000565844 STXBP3O00186 592 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 STAT3P40763 770 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 NAPAP54920 295 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 SPATC1LQ9H0A9 340 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 HOMER2Q9NSB8 354 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 BARHL2Q9NY43 387 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 VPS54Q9P1Q0 977 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 ABCB11O95342 1321 aa17.58■□□□□ 0.4
KNOP1-203ENST00000565844 BCRP11274 1271 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 ALAS1P13196 640 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 XBP1P17861 261 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 ERVK-9P63128 1117 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 ERVK-24P63145 666 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 TRIM29Q14134 588 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 GPRC5AQ8NFJ5 357 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 C8orf76Q96K31 380 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 MORF4L1Q9UBU8 362 aa17.57■□□□□ 0.4
KNOP1-203ENST00000565844 PRKCZQ05513 592 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 FAM110CQ1W6H9 321 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 TYW1BQ6NUM6 668 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 CCDC148Q8NFR7 591 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 RAET1EQ8TD07 263 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 CCDC12Q8WUD4 166 aaPredicted RBP17.56■□□□□ 0.4
KNOP1-203ENST00000565844 MOV10L1Q9BXT6 1211 aaKnown RBP17.56■□□□□ 0.4
KNOP1-203ENST00000565844 GJB4Q9NTQ9 266 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 RIPK3Q9Y572 518 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 PLXNB2O15031 1838 aa17.56■□□□□ 0.4
KNOP1-203ENST00000565844 PDCP20941 246 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 CCNA1P78396 465 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 MTFR1Q15390 333 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 Q3C1V9 767 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
KNOP1-203ENST00000565844 RIOX2Q8IUF8 465 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 SHISA4Q96DD7 197 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 CWC22Q9HCG8 908 aaKnown RBP17.55■□□□□ 0.4
KNOP1-203ENST00000565844 RNF146Q9NTX7 359 aa17.55■□□□□ 0.4
KNOP1-203ENST00000565844 MRPL11Q9Y3B7 192 aaKnown RBP17.55■□□□□ 0.4
KNOP1-203ENST00000565844 COPB2P35606 906 aa17.54■□□□□ 0.4
KNOP1-203ENST00000565844 FCGRTP55899 365 aa17.54■□□□□ 0.4
KNOP1-203ENST00000565844 GUCY1B3Q02153 619 aa17.54■□□□□ 0.4
KNOP1-203ENST00000565844 TKFCQ3LXA3 575 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms