RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CYP39A1Q9NYL5 469 aa17.98■□□□□ 0.47
COMMD4-212ENST00000565517 LCTP09848 1927 aa17.98■□□□□ 0.47
COMMD4-212ENST00000565517 BAZ2BQ9UIF8 2168 aaKnown RBP17.97■□□□□ 0.47
COMMD4-212ENST00000565517 DDAH1O94760 285 aa17.97■□□□□ 0.47
COMMD4-212ENST00000565517 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
COMMD4-212ENST00000565517 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
COMMD4-212ENST00000565517 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
COMMD4-212ENST00000565517 RGS22Q8NE09 1264 aa17.97■□□□□ 0.47
COMMD4-212ENST00000565517 CLEC4DQ8WXI8 215 aa17.97■□□□□ 0.47
COMMD4-212ENST00000565517 FGD4Q96M96 766 aa17.97■□□□□ 0.47
COMMD4-212ENST00000565517 CNPY2Q9Y2B0 182 aa17.97■□□□□ 0.47
COMMD4-212ENST00000565517 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-212ENST00000565517 EXOSC10Q01780 885 aaKnown RBP17.96■□□□□ 0.47
COMMD4-212ENST00000565517 CNTN2Q02246 1040 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 COL9A3Q14050 684 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-212ENST00000565517 QRICH1Q2TAL8 776 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 PRAMEF19Q5SWL8 479 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 NSMFQ6X4W1 530 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 RIOX1Q9H6W3 641 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 VAT1LQ9HCJ6 419 aa17.96■□□□□ 0.47
COMMD4-212ENST00000565517 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-212ENST00000565517 ABCB11O95342 1321 aa17.96■□□□□ 0.46
COMMD4-212ENST00000565517 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 SOWAHBA6NEL2 793 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 ASB14A6NK59 587 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 NFIBO00712 420 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
COMMD4-212ENST00000565517 ZNF865P0CJ78 1059 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-212ENST00000565517 CALM1P0DP23 149 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 CALM2P0DP24 149 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 CALM3P0DP25 149 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 KIF5BP33176 963 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 MNX1P50219 401 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-212ENST00000565517 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
COMMD4-212ENST00000565517 NFXL1Q6ZNB6 911 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 NECAB2Q7Z6G3 386 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 SGMS1Q86VZ5 419 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 FBXO11Q86XK2 927 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 ABHD16BQ9H3Z7 469 aa17.95■□□□□ 0.46
COMMD4-212ENST00000565517 ZBTB5O15062 677 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 TAL1P17542 331 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 TRAF1Q13077 416 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 BAATQ14032 418 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 USH1GQ495M9 461 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 PAWRQ96IZ0 340 aaKnown RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 LZTS2Q9BRK4 669 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 HTATIP2Q9BUP3 242 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
COMMD4-212ENST00000565517 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 ADD3Q9UEY8 706 aaKnown RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
COMMD4-212ENST00000565517 PTPDC1A2A3K4 754 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 AKR1A1P14550 325 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 GNAQP50148 359 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 ACVR2BQ13705 512 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 ARMCX2Q7L311 632 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 CCDC144CPQ8IYA2 1237 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 ARRDC4Q8NCT1 418 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
COMMD4-212ENST00000565517 CYTH3O43739 400 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 RPS6P62753 249 aaKnown RBP17.92■□□□□ 0.46
COMMD4-212ENST00000565517 SLC35G1Q2M3R5 365 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 DNERQ8NFT8 737 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 MORC4Q8TE76 937 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 DIS3LQ8TF46 1054 aaKnown RBP17.92■□□□□ 0.46
COMMD4-212ENST00000565517 SPZ1Q9BXG8 430 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 FAM184BQ9ULE4 1060 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 ASTN1O14525 1302 aa17.92■□□□□ 0.46
COMMD4-212ENST00000565517 PNMA6FA0A0J9YX94 578 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 DNM1LO00429 736 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 RARBP10826 455 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 COL6A1P12109 1028 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 PSMA5P28066 241 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 SYNE3Q6ZMZ3 975 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 FBXL16Q8N461 479 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 SAMD3Q8N6K7 520 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 KATNBL1Q9H079 304 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 C11orf49Q9H6J7 331 aa17.91■□□□□ 0.46
COMMD4-212ENST00000565517 MAP3K20Q9NYL2 800 aaKnown RBP17.91■□□□□ 0.46
COMMD4-212ENST00000565517 ALPK3Q96L96 1907 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
COMMD4-212ENST00000565517 CALML3P27482 149 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 ALDH5A1P51649 535 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-212ENST00000565517 GHRHRQ02643 423 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 FANCBQ8NB91 859 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms