RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ACLYP53396 1101 aa11.79□□□□□ -0.52
CMTM3-209ENST00000565003 NSMFQ6X4W1 530 aa11.79□□□□□ -0.52
CMTM3-209ENST00000565003 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
CMTM3-209ENST00000565003 PURBQ96QR8 312 aaKnown RBP11.79□□□□□ -0.52
CMTM3-209ENST00000565003 PRDM5Q9NQX1 630 aaPredicted RBP11.79□□□□□ -0.52
CMTM3-209ENST00000565003 PDLIM7Q9NR12 457 aa11.79□□□□□ -0.52
CMTM3-209ENST00000565003 DNAH12Q6ZR08 3092 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 MOXD2PA6NHM9 499 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 ASB14A6NK59 587 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 CTAGE5O15320 804 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 GOLGA8HP0CJ92 632 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 PTGS1P23219 599 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 CST5P28325 142 aaPredicted RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 TLE2Q04725 743 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 KCNA10Q16322 511 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 IMMTQ16891 758 aaKnown RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 LRIT3Q3SXY7 679 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 IQCA1Q86XH1 822 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 DGKHQ86XP1 1220 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 ZSCAN10Q96SZ4 725 aaPredicted RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 LBHD1Q9BQE6 289 aaPredicted RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 TSEN34Q9BSV6 310 aaKnown RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 UPF3AQ9H1J1 476 aaKnown RBP11.78□□□□□ -0.52
CMTM3-209ENST00000565003 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 ZSWIM5Q9P217 1185 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 RAD50Q92878 1312 aa11.78□□□□□ -0.52
CMTM3-209ENST00000565003 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 ITGB8P26012 769 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 CHMLP26374 656 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 NT5C2P49902 561 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 GJA9P57773 515 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
CMTM3-209ENST00000565003 GPATCH4Q5T3I0 446 aaKnown RBP11.77□□□□□ -0.53
CMTM3-209ENST00000565003 SLC30A10Q6XR72 485 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 FBXO16Q8IX29 292 aaPredicted RBP11.77□□□□□ -0.53
CMTM3-209ENST00000565003 PNMA1Q8ND90 353 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 CLEC4DQ8WXI8 215 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 ANKS1AQ92625 1134 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
CMTM3-209ENST00000565003 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 TNKSO95271 1327 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
CMTM3-209ENST00000565003 PQBP1O60828 265 aaKnown RBP11.76□□□□□ -0.53
CMTM3-209ENST00000565003 ASGR1P07306 291 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 PTH1RQ03431 593 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 CCDC178Q5BJE1 867 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 TAPT1Q6NXT6 567 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 MORC4Q8TE76 937 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 BADQ92934 168 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 KRT23Q9C075 422 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 UBA5Q9GZZ9 404 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 KAT14Q9H8E8 782 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
CMTM3-209ENST00000565003 GNEQ9Y223 722 aaKnown RBP11.76□□□□□ -0.53
CMTM3-209ENST00000565003 PTPDC1A2A3K4 754 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 CLTBP09497 229 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 SMPD1P17405 629 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
CMTM3-209ENST00000565003 NKX3-2P78367 333 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 BEX3Q00994 111 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 GNASQ5JWF2 1037 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 NOL8Q76FK4 1167 aaKnown RBP11.75□□□□□ -0.53
CMTM3-209ENST00000565003 ANKRD33Q7Z3H0 272 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 TLK2Q86UE8 772 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 PCSK9Q8NBP7 692 aaKnown RBP11.75□□□□□ -0.53
CMTM3-209ENST00000565003 NUP133Q8WUM0 1156 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 GLT1D1Q96MS3 346 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 UBAC1Q9BSL1 405 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 CNNM2Q9H8M5 875 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 SPC25Q9HBM1 224 aa11.75□□□□□ -0.53
CMTM3-209ENST00000565003 CYP21A2P08686 494 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 CALML3P27482 149 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 RPS6P62753 249 aaKnown RBP11.74□□□□□ -0.53
CMTM3-209ENST00000565003 FAAP100Q0VG06 881 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 SEC23AQ15436 765 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
CMTM3-209ENST00000565003 USH1GQ495M9 461 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 RNF207Q6ZRF8 634 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 Q7L0L9 218 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 CYB5R4Q7L1T6 521 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 ADGRF4Q8IZF3 695 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 RUFY2Q8WXA3 655 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 TOX2Q96NM4 488 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 VTA1Q9NP79 307 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
CMTM3-209ENST00000565003 PNMA2Q9UL42 364 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 TAF6LQ9Y6J9 622 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 ELP1O95163 1332 aa11.74□□□□□ -0.53
CMTM3-209ENST00000565003 DCDC2CA8MYV0 355 aa11.73□□□□□ -0.53
CMTM3-209ENST00000565003 KIAA0355O15063 1070 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms