RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CDR1P51861 262 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 EPHB3P54753 998 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 SLC7A5Q01650 507 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 MVKQ03426 396 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 KIR3DS1Q14943 382 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
CHD9-212ENST00000564641 RCSD1Q6JBY9 416 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 ZC3H14Q6PJT7 736 aaKnown RBP7.28□□□□□ -1.24
CHD9-212ENST00000564641 PAQR3Q6TCH7 311 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 RPTNQ6XPR3 784 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 CCDC81Q6ZN84 652 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 LDHDQ86WU2 507 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 NT5DC4Q86YG4 428 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 HOMEZQ8IX15 550 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 ZCCHC4Q9H5U6 513 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 PDLIM7Q9NR12 457 aa7.28□□□□□ -1.24
CHD9-212ENST00000564641 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.28□□□□□ -1.24
CHD9-212ENST00000564641 PPM1BO75688 479 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 CD3EP07766 207 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 L1CAMP32004 1257 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 AFF3P51826 1226 aaKnown RBP7.27□□□□□ -1.25
CHD9-212ENST00000564641 DACT3Q96B18 629 aaPredicted RBP7.27□□□□□ -1.25
CHD9-212ENST00000564641 SEC16BQ96JE7 1060 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 FAM86C1Q9NVL1 165 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 STRIP2Q9ULQ0 834 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 LTBP3Q9NS15 1303 aa7.27□□□□□ -1.25
CHD9-212ENST00000564641 PFKLP17858 780 aa7.26□□□□□ -1.25
CHD9-212ENST00000564641 BMP7P18075 431 aa7.26□□□□□ -1.25
CHD9-212ENST00000564641 CTSWP56202 376 aa7.26□□□□□ -1.25
CHD9-212ENST00000564641 TARBP2Q15633 366 aaKnown RBP7.26□□□□□ -1.25
CHD9-212ENST00000564641 CNKSR3Q6P9H4 555 aa7.26□□□□□ -1.25
CHD9-212ENST00000564641 MARCH10Q8NA82 808 aaPredicted RBP7.26□□□□□ -1.25
CHD9-212ENST00000564641 MRRFQ96E11 262 aaKnown RBP7.26□□□□□ -1.25
CHD9-212ENST00000564641 ZDHHC15Q96MV8 337 aa7.26□□□□□ -1.25
CHD9-212ENST00000564641 PCDHA5Q9Y5H7 936 aa7.26□□□□□ -1.25
CHD9-212ENST00000564641 TRBV23OR9-2A0A075B6M9 112 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 A0A1W2PQH9 124 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 SASH1O94885 1247 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 GRB10Q13322 594 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 PLEKHN1Q494U1 663 aaPredicted RBP7.25□□□□□ -1.25
CHD9-212ENST00000564641 BICRALQ6AI39 1079 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 ADAT2Q7Z6V5 191 aaKnown RBP7.25□□□□□ -1.25
CHD9-212ENST00000564641 IGDCC3Q8IVU1 814 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 NLGN1Q8N2Q7 840 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 CPLX3Q8WVH0 158 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 RCC1LQ96I51 464 aaKnown RBP7.25□□□□□ -1.25
CHD9-212ENST00000564641 KCNC2Q96PR1 638 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 KLHL25Q9H0H3 589 aa7.25□□□□□ -1.25
CHD9-212ENST00000564641 AURKAO14965 403 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 DBHP09172 617 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 IFNGR1P15260 489 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 HOXA5P20719 270 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 CASP7P55210 303 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 HDLBPQ00341 1268 aaKnown RBP7.24□□□□□ -1.25
CHD9-212ENST00000564641 CAP1Q01518 475 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 CABP7Q86V35 215 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 FAM129CQ86XR2 697 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 TGIF2Q9GZN2 237 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 IRS2Q9Y4H2 1338 aa7.24□□□□□ -1.25
CHD9-212ENST00000564641 BUB1BO60566 1050 aaPredicted RBP7.23□□□□□ -1.25
CHD9-212ENST00000564641 MSL3P1P0C860 447 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 NAT2P11245 290 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 PPP2R5DQ14738 602 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 SP8Q8IXZ3 490 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 ARHGEF39Q8N4T4 335 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 CRACR2BQ8N4Y2 399 aaPredicted RBP7.23□□□□□ -1.25
CHD9-212ENST00000564641 PANK1Q8TE04 598 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 SHDQ96IW2 340 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 RNF38Q9H0F5 515 aa7.23□□□□□ -1.25
CHD9-212ENST00000564641 EPHX1P07099 455 aa7.22□□□□□ -1.25
CHD9-212ENST00000564641 NASPP49321 788 aaPredicted RBP7.22□□□□□ -1.25
CHD9-212ENST00000564641 SEPHS1P49903 392 aa7.22□□□□□ -1.25
CHD9-212ENST00000564641 AMPD2Q01433 879 aa7.22□□□□□ -1.25
CHD9-212ENST00000564641 PPP2R5EQ16537 467 aa7.22□□□□□ -1.25
CHD9-212ENST00000564641 TMEFF1Q8IYR6 380 aa7.22□□□□□ -1.25
CHD9-212ENST00000564641 EPB41L4AQ9HCS5 686 aaPredicted RBP7.22□□□□□ -1.25
CHD9-212ENST00000564641 BACE2Q9Y5Z0 518 aa7.22□□□□□ -1.25
CHD9-212ENST00000564641 ANKRD34BA5PLL1 514 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 B8ZZF3 427 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 PRRG2O14669 202 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 TRIM13O60858 407 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 ZNF143P52747 638 aaPredicted RBP7.21□□□□□ -1.26
CHD9-212ENST00000564641 POMZP3Q6PJE2 187 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 LINC01356Q8N9X3 169 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 ADCY4Q8NFM4 1077 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 PWWP2AQ96N64 755 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 CGGBP1Q9UFW8 167 aaPredicted RBP7.21□□□□□ -1.26
CHD9-212ENST00000564641 DBR1Q9UK59 544 aaKnown RBP7.21□□□□□ -1.26
CHD9-212ENST00000564641 SUGT1Q9Y2Z0 365 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 NCANO14594 1321 aa7.21□□□□□ -1.26
CHD9-212ENST00000564641 C2orf71A6NGG8 1288 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 IGFBP6P24592 240 aaPredicted RBP7.2□□□□□ -1.26
CHD9-212ENST00000564641 ZNF200P98182 395 aaPredicted RBP7.2□□□□□ -1.26
CHD9-212ENST00000564641 VHLLQ6RSH7 139 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 KLHL6Q8WZ60 621 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 RELTQ969Z4 430 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 NUDT5Q9UKK9 219 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms