RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 PBX4Q9BYU1 374 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 STX8Q9UNK0 236 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDR2-204ENST00000564542 LCTP09848 1927 aa16.72■□□□□ 0.27
CDR2-204ENST00000564542 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
CDR2-204ENST00000564542 ALAS1P13196 640 aa16.71■□□□□ 0.27
CDR2-204ENST00000564542 PBX2P40425 430 aa16.71■□□□□ 0.27
CDR2-204ENST00000564542 FSCN1Q16658 493 aaKnown RBP16.71■□□□□ 0.27
CDR2-204ENST00000564542 CXCL17Q6UXB2 119 aa16.71■□□□□ 0.27
CDR2-204ENST00000564542 ZNF365Q70YC5 407 aa16.71■□□□□ 0.27
CDR2-204ENST00000564542 KCTD1Q719H9 257 aa16.71■□□□□ 0.27
CDR2-204ENST00000564542 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 FOXP2O15409 715 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 ACRP10323 421 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 SMPD1P17405 629 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 CYP2C18P33260 490 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
CDR2-204ENST00000564542 SEZ6LQ9BYH1 1024 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 IL17RBQ9NRM6 502 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 PRR12Q9ULL5 1215 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 MUC3AQ02505 3323 aa16.7■□□□□ 0.26
CDR2-204ENST00000564542 GRXCR1A8MXD5 290 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 ZEB2O60315 1214 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 NMT2O60551 498 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 MX1P20591 662 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 ITGA7Q13683 1181 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 MUM1L1Q5H9M0 696 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 TJAP1Q5JTD0 557 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 RASGRP2Q7LDG7 609 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
CDR2-204ENST00000564542 HERVK_113Q902F9 699 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 GAS2L1Q99501 681 aaPredicted RBP16.69■□□□□ 0.26
CDR2-204ENST00000564542 MTIF3Q9H2K0 278 aaKnown RBP16.69■□□□□ 0.26
CDR2-204ENST00000564542 Q9Y3F1 56 aa16.69■□□□□ 0.26
CDR2-204ENST00000564542 GBF1Q92538 1859 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 ICAM1P05362 532 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 NOVP48745 357 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 SNAP25P60880 206 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 CTDSPL2Q05D32 466 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 RAB30Q15771 203 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 MORC4Q8TE76 937 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 VTA1Q9NP79 307 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 ANAPC4Q9UJX5 808 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 DDX49Q9Y6V7 483 aaKnown RBP16.68■□□□□ 0.26
CDR2-204ENST00000564542 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
CDR2-204ENST00000564542 DYNC1LI2O43237 492 aaPredicted RBP16.67■□□□□ 0.26
CDR2-204ENST00000564542 PTGS1P23219 599 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 EEPD1Q7L9B9 569 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
CDR2-204ENST00000564542 RANBP17Q9H2T7 1088 aaKnown RBP16.67■□□□□ 0.26
CDR2-204ENST00000564542 PRDM6Q9NQX0 595 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 CXXC1Q9P0U4 656 aaPredicted RBP16.67■□□□□ 0.26
CDR2-204ENST00000564542 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 CHD7Q9P2D1 2997 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 SALL3Q9BXA9 1300 aa16.67■□□□□ 0.26
CDR2-204ENST00000564542 ORC4O43929 436 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 B4GALT4O60513 344 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
CDR2-204ENST00000564542 FGBP02675 491 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 TRPV6Q9H1D0 765 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 WNT8AQ9H1J5 351 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 PRDM12Q9H4Q4 367 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 INCENPQ9NQS7 918 aa16.66■□□□□ 0.26
CDR2-204ENST00000564542 LOC102724159A0A0B4J2E5 919 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 FGRP09769 529 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 PSMC6P62333 389 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 PWP2Q15269 919 aaKnown RBP16.65■□□□□ 0.26
CDR2-204ENST00000564542 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 TMEM63BQ5T3F8 832 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 PURBQ96QR8 312 aaKnown RBP16.65■□□□□ 0.26
CDR2-204ENST00000564542 ADD3Q9UEY8 706 aaKnown RBP16.65■□□□□ 0.26
CDR2-204ENST00000564542 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
CDR2-204ENST00000564542 ALDH5A1P51649 535 aaPredicted RBP16.64■□□□□ 0.25
CDR2-204ENST00000564542 CCL23P55773 120 aa16.64■□□□□ 0.25
CDR2-204ENST00000564542 BAATQ14032 418 aaPredicted RBP16.64■□□□□ 0.25
CDR2-204ENST00000564542 ALX1Q15699 326 aa16.64■□□□□ 0.25
CDR2-204ENST00000564542 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
CDR2-204ENST00000564542 OTOP2Q7RTS6 562 aa16.64■□□□□ 0.25
CDR2-204ENST00000564542 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
CDR2-204ENST00000564542 THEGQ9P2T0 379 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms