RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 COG2Q14746 738 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 Q3C1V9 767 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 PRPF38AQ8NAV1 312 aaKnown RBP19.57■□□□□ 0.72
CMTM3-208ENST00000564247 PIBF1Q8WXW3 757 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 CPVLQ9H3G5 476 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 GJD2Q9UKL4 321 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 PARP14Q460N5 1801 aa19.57■□□□□ 0.72
CMTM3-208ENST00000564247 CYTH3O43739 400 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 ADCY3O60266 1144 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 DTNBO60941 627 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 FLOT1O75955 427 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 FDPSP14324 419 aaKnown RBP19.56■□□□□ 0.72
CMTM3-208ENST00000564247 XBP1P17861 261 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
CMTM3-208ENST00000564247 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 SLF1Q9BQI6 1058 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 JMJD4Q9H9V9 463 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 PRR12Q9ULL5 1215 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 CTDP1Q9Y5B0 961 aaPredicted RBP19.56■□□□□ 0.72
CMTM3-208ENST00000564247 MYH6P13533 1939 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 A0A0G2JMZ2 1700 aa19.56■□□□□ 0.72
CMTM3-208ENST00000564247 PNMA6FA0A0J9YX94 578 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 FDX1P10109 184 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 CCNA1P78396 465 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 TRAF1Q13077 416 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 TRIM29Q14134 588 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
CMTM3-208ENST00000564247 HOMER1Q86YM7 354 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 PIGSQ96S52 555 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 ALG1Q9BT22 464 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 PORCNQ9H237 461 aa19.55■□□□□ 0.72
CMTM3-208ENST00000564247 hCG_1642624A0A1W2PR95 340 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 H3BQV1 296 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 ZBED4O75132 1171 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 SCG2P13521 617 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 UBXN2AP68543 259 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 MTFR1Q15390 333 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 PFKFB3Q16875 520 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-208ENST00000564247 CCAR1Q8IX12 1150 aaKnown RBP19.54■□□□□ 0.72
CMTM3-208ENST00000564247 FBXO28Q9NVF7 368 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 BTBD7Q9P203 1132 aa19.54■□□□□ 0.72
CMTM3-208ENST00000564247 BIN2Q9UBW5 565 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-208ENST00000564247 ZBTB5O15062 677 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 MYCP01106 439 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-208ENST00000564247 ELNP15502 786 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 DSG3P32926 999 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 SLC35G1Q2M3R5 365 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 SOCS4Q8WXH5 440 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 C8orf76Q96K31 380 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 NUDT12Q9BQG2 462 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
CMTM3-208ENST00000564247 hCG_1984214I3L0E3 225 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 EN2P19622 333 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-208ENST00000564247 PKN1Q16512 942 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 CDC37Q16543 378 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-208ENST00000564247 GPR142Q7Z601 462 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 PLEKHH3Q7Z736 793 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 ZNF713Q8N859 430 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-208ENST00000564247 MB21D1Q8N884 522 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 MTMR8Q96EF0 704 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 PNMA2Q9UL42 364 aa19.52■□□□□ 0.72
CMTM3-208ENST00000564247 INHAP05111 366 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 XRCC5P13010 732 aaKnown RBP19.51■□□□□ 0.71
CMTM3-208ENST00000564247 CCL5P13501 91 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 SYT1P21579 422 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 NUCB2P80303 420 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 MORN1Q5T089 497 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 HEATR3Q7Z4Q2 680 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 CCDC12Q8WUD4 166 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-208ENST00000564247 USP6NLQ92738 828 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 RANBP17Q9H2T7 1088 aaKnown RBP19.51■□□□□ 0.71
CMTM3-208ENST00000564247 SH3GLB2Q9NR46 395 aa19.51■□□□□ 0.71
CMTM3-208ENST00000564247 CIZ1Q9ULV3 898 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-208ENST00000564247 COL11A1P12107 1806 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-208ENST00000564247 PDE4DIPQ5VU43 2346 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 STX6O43752 255 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 QRICH1Q2TAL8 776 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 FBXO11Q86XK2 927 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 FAM177A1Q8N128 213 aaPredicted RBP19.5■□□□□ 0.71
CMTM3-208ENST00000564247 ATG4CQ96DT6 458 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 AMNQ9BXJ7 453 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 SPATC1LQ9H0A9 340 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 CHMP5Q9NZZ3 219 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 ADAMTS5Q9UNA0 930 aa19.5■□□□□ 0.71
CMTM3-208ENST00000564247 HMGCRP04035 888 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 GJB1P08034 283 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 CYP2B6P20813 491 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 FOSBP53539 338 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 SNAP25P60880 206 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 SAFBQ15424 915 aaKnown RBP eCLIP19.49■□□□□ 0.71
CMTM3-208ENST00000564247 CCDC174Q6PII3 467 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 CCDC148Q8NFR7 591 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 AIFM3Q96NN9 605 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 MOV10L1Q9BXT6 1211 aaKnown RBP19.49■□□□□ 0.71
CMTM3-208ENST00000564247 RNF208Q9H0X6 261 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 BARHL2Q9NY43 387 aa19.49■□□□□ 0.71
CMTM3-208ENST00000564247 VPS37CA5D8V6 355 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-208ENST00000564247 VWA5AO00534 786 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms