RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ANKS1AQ92625 1134 aa19.11■□□□□ 0.65
RNF40-205ENST00000563909 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.65
RNF40-205ENST00000563909 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
RNF40-205ENST00000563909 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
RNF40-205ENST00000563909 LCHNA4D1U4 455 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 ZBED4O75132 1171 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 SUPT20HL2P0C7V6 817 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 CNTN2Q02246 1040 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 POLA2Q14181 598 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 PRPF38AQ8NAV1 312 aaKnown RBP19.1■□□□□ 0.65
RNF40-205ENST00000563909 MTUS1Q9ULD2 1270 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 DDX19BQ9UMR2 479 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 COG6Q9Y2V7 657 aa19.1■□□□□ 0.65
RNF40-205ENST00000563909 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
RNF40-205ENST00000563909 TNKSO95271 1327 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 COL4A4P53420 1690 aaPredicted RBP19.09■□□□□ 0.65
RNF40-205ENST00000563909 GRXCR2A6NFK2 248 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 ATP2A1O14983 1001 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 SURF6O75683 361 aaKnown RBP19.09■□□□□ 0.65
RNF40-205ENST00000563909 SMPD1P17405 629 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 RFC2P35250 354 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 CDK8P49336 464 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 SLC9C2Q5TAH2 1124 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 C20orf194Q5TEA3 1177 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 HFE2Q6ZVN8 426 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 RAVER2Q9HCJ3 691 aaKnown RBP19.09■□□□□ 0.65
RNF40-205ENST00000563909 FBXO40Q9UH90 709 aa19.09■□□□□ 0.65
RNF40-205ENST00000563909 ST18O60284 1047 aa19.08■□□□□ 0.64
RNF40-205ENST00000563909 CENPBP07199 599 aaPredicted RBP19.08■□□□□ 0.64
RNF40-205ENST00000563909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.08■□□□□ 0.64
RNF40-205ENST00000563909 LCORLQ8N3X6 602 aa19.08■□□□□ 0.64
RNF40-205ENST00000563909 SSH3Q8TE77 659 aa19.08■□□□□ 0.64
RNF40-205ENST00000563909 EAF2Q96CJ1 260 aaPredicted RBP19.08■□□□□ 0.64
RNF40-205ENST00000563909 SUGCTQ9HAC7 445 aa19.08■□□□□ 0.64
RNF40-205ENST00000563909 SCN5AQ14524 2016 aa19.08■□□□□ 0.64
RNF40-205ENST00000563909 CYP2D7A0A087X1C5 515 aa19.07■□□□□ 0.64
RNF40-205ENST00000563909 PDE6AP16499 860 aa19.07■□□□□ 0.64
RNF40-205ENST00000563909 CHST13Q8NET6 341 aa19.07■□□□□ 0.64
RNF40-205ENST00000563909 MFSD14AQ96MC6 490 aa19.07■□□□□ 0.64
RNF40-205ENST00000563909 ZBED2Q9BTP6 218 aa19.07■□□□□ 0.64
RNF40-205ENST00000563909 MYH8P13535 1937 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 IQCF3P0C7M6 154 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 KCNJ6P48051 423 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 PUS10Q3MIT2 529 aaKnown RBP19.06■□□□□ 0.64
RNF40-205ENST00000563909 TMEM63BQ5T3F8 832 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 TMCO2Q7Z6W1 182 aaPredicted RBP19.06■□□□□ 0.64
RNF40-205ENST00000563909 RETREG2Q8NC44 543 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 KIFC2Q96AC6 838 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 PDGFCQ9NRA1 345 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 HOMER2Q9NSB8 354 aa19.06■□□□□ 0.64
RNF40-205ENST00000563909 ZNF532Q9HCE3 1301 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 ASB14A6NK59 587 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 PRKAB2O43741 272 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 BAIAP3O94812 1187 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 C12orf60Q5U649 245 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 IQSEC1Q6DN90 963 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 FAM133AQ8N9E0 248 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 ARMT1Q9H993 441 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 SLC38A10Q9HBR0 1119 aa19.05■□□□□ 0.64
RNF40-205ENST00000563909 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
RNF40-205ENST00000563909 ZNF318Q5VUA4 2279 aa19.04■□□□□ 0.64
RNF40-205ENST00000563909 SOWAHBA6NEL2 793 aa19.04■□□□□ 0.64
RNF40-205ENST00000563909 F5H6K3 240 aa19.04■□□□□ 0.64
RNF40-205ENST00000563909 KLRC3Q07444 240 aa19.04■□□□□ 0.64
RNF40-205ENST00000563909 EEPD1Q7L9B9 569 aa19.04■□□□□ 0.64
RNF40-205ENST00000563909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.04■□□□□ 0.64
RNF40-205ENST00000563909 Q9Y3F1 56 aa19.04■□□□□ 0.64
RNF40-205ENST00000563909 ZFHX2Q9C0A1 2572 aaPredicted RBP19.04■□□□□ 0.64
RNF40-205ENST00000563909 H3BQ06 376 aaPredicted RBP19.03■□□□□ 0.64
RNF40-205ENST00000563909 PITPNM1O00562 1244 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 ERVK-21P61565 698 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 TTF1Q15361 905 aaPredicted RBP19.03■□□□□ 0.64
RNF40-205ENST00000563909 FAM47CQ5HY64 1035 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 TAPT1Q6NXT6 567 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 C16orf86Q6ZW13 317 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 AMOTL1Q8IY63 956 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 TGS1Q96RS0 853 aaKnown RBP19.03■□□□□ 0.64
RNF40-205ENST00000563909 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.03■□□□□ 0.64
RNF40-205ENST00000563909 ATP8A2Q9NTI2 1148 aa19.03■□□□□ 0.64
RNF40-205ENST00000563909 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
RNF40-205ENST00000563909 USP17L12C9JPN9 530 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 USP17L21D6R901 530 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 NDUFB10O96000 172 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 WDR5P61964 334 aaKnown RBP19.02■□□□□ 0.64
RNF40-205ENST00000563909 FOXK2Q01167 660 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 ZP2Q05996 745 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 FBXO16Q8IX29 292 aaPredicted RBP19.02■□□□□ 0.64
RNF40-205ENST00000563909 NEK9Q8TD19 979 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 PPP1R13LQ8WUF5 828 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 C1orf115Q9H7X2 142 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 POLR3EQ9NVU0 708 aa19.02■□□□□ 0.64
RNF40-205ENST00000563909 C5orf42Q9H799 3197 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 TCRBV5S4A2TA0A5A2 114 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 MYL3P08590 195 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 OAZ1P54368 228 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 PURAQ00577 322 aaKnown RBP19.01■□□□□ 0.63
RNF40-205ENST00000563909 PRSS33Q8NF86 280 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 RAD9AQ99638 391 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 ACAD9Q9H845 621 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms