RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 LTV1Q96GA3 475 aaPredicted RBP6.02□□□□□ -1.45
CDR2-203ENST00000563573 HSPA12BQ96MM6 686 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 MIR1-1HGQ9H1L0 117 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 FBRSQ9HAH7 460 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 SEMA3GQ9NS98 782 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 CTNND2Q9UQB3 1225 aa6.02□□□□□ -1.45
CDR2-203ENST00000563573 NFAT5O94916 1531 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 LRRC10BA6NIK2 292 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 DBX1A6NMT0 343 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 GFRA2O00451 464 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 GRK4P32298 578 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 ETV3P41162 512 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 TSNAXIP1Q2TAA8 658 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 CDKAL1Q5VV42 579 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 SLC6A19Q695T7 634 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 SULT6B1Q6IMI4 303 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 MRPL41Q8IXM3 137 aaKnown RBP6.01□□□□□ -1.45
CDR2-203ENST00000563573 CCDC146Q8IYE0 955 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 PIWIL2Q8TC59 973 aaKnown RBP6.01□□□□□ -1.45
CDR2-203ENST00000563573 PRDM7Q9NQW5 492 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 CAPN6Q9Y6Q1 641 aa6.01□□□□□ -1.45
CDR2-203ENST00000563573 MED1Q15648 1581 aaPredicted RBP6.01□□□□□ -1.45
CDR2-203ENST00000563573 BLMP54132 1417 aaPredicted RBP6□□□□□ -1.45
CDR2-203ENST00000563573 PEAK1Q9H792 1746 aa6□□□□□ -1.45
CDR2-203ENST00000563573 CRYBG1Q9Y4K1 1723 aa6□□□□□ -1.45
CDR2-203ENST00000563573 APAF1O14727 1248 aa6□□□□□ -1.45
CDR2-203ENST00000563573 HMOX1P09601 288 aa6□□□□□ -1.45
CDR2-203ENST00000563573 LIG3P49916 1009 aa6□□□□□ -1.45
CDR2-203ENST00000563573 NKG7Q16617 165 aa6□□□□□ -1.45
CDR2-203ENST00000563573 PRAMEF13Q5VWM6 474 aa6□□□□□ -1.45
CDR2-203ENST00000563573 PDZRN4Q6ZMN7 1036 aaPredicted RBP6□□□□□ -1.45
CDR2-203ENST00000563573 SND1Q7KZF4 910 aaKnown RBP eCLIP6□□□□□ -1.45
CDR2-203ENST00000563573 CCDC84Q86UT8 332 aaPredicted RBP6□□□□□ -1.45
CDR2-203ENST00000563573 TCP11L2Q8N4U5 519 aa6□□□□□ -1.45
CDR2-203ENST00000563573 DUSP9Q99956 384 aaKnown RBP6□□□□□ -1.45
CDR2-203ENST00000563573 NOC4LQ9BVI4 516 aaKnown RBP6□□□□□ -1.45
CDR2-203ENST00000563573 CARS2Q9HA77 564 aaKnown RBP6□□□□□ -1.45
CDR2-203ENST00000563573 PRDM11Q9NQV5 511 aa6□□□□□ -1.45
CDR2-203ENST00000563573 ADAM30Q9UKF2 790 aa6□□□□□ -1.45
CDR2-203ENST00000563573 ST14Q9Y5Y6 855 aa6□□□□□ -1.45
CDR2-203ENST00000563573 COL3A1P02461 1466 aaPredicted RBP6□□□□□ -1.45
CDR2-203ENST00000563573 ZBED9Q6R2W3 1325 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 COL22A1Q8NFW1 1626 aaPredicted RBP5.99□□□□□ -1.45
CDR2-203ENST00000563573 FAM208AQ9UK61 1670 aaKnown RBP5.99□□□□□ -1.45
CDR2-203ENST00000563573 CPDO75976 1380 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 KIAA0232Q92628 1395 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 ANKRD33BA6NCL7 494 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 H3BS24 57 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 CBX7O95931 251 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 PGRP06401 933 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 GLI1P08151 1106 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 PRKAR2BP31323 418 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 GDNFP39905 211 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 ST13P50502 369 aaKnown RBP5.99□□□□□ -1.45
CDR2-203ENST00000563573 RIPK4P57078 832 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 RPL6Q02878 288 aaKnown RBP5.99□□□□□ -1.45
CDR2-203ENST00000563573 CHRNA2Q15822 529 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 TMEM67Q5HYA8 995 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 TMPRSS7Q7RTY8 843 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 KIRREL1Q96J84 757 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 ATP13A1Q9HD20 1204 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 ABCA3Q99758 1704 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 COL16A1Q07092 1604 aaPredicted RBP5.99□□□□□ -1.45
CDR2-203ENST00000563573 ABCC6O95255 1503 aa5.99□□□□□ -1.45
CDR2-203ENST00000563573 RGPD2P0DJD1 1756 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 COL18A1P39060 1754 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 JCADQ9P266 1359 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 FAM83GA6ND36 823 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 PRR33A8MZF0 331 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 RAC2P15153 192 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 LMOD3Q0VAK6 560 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 PSMD2Q13200 908 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 SEPT6Q14141 434 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 TAF1CQ15572 869 aaPredicted RBP5.98□□□□□ -1.45
CDR2-203ENST00000563573 AMOTQ4VCS5 1084 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 NBPF6Q5VWK0 638 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 TOM1L2Q6ZVM7 507 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 TMEM87BQ96K49 555 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 NBPF4Q96M43 638 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 PLEKHF1Q96S99 279 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 PPP1R16BQ96T49 567 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 PCDHB5Q9Y5E4 795 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 COL14A1Q05707 1796 aaKnown RBP5.98□□□□□ -1.45
CDR2-203ENST00000563573 SPATA31A6Q5VVP1 1343 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 IGSF1Q8N6C5 1336 aa5.98□□□□□ -1.45
CDR2-203ENST00000563573 ARID1BQ8NFD5 2236 aaPredicted RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 ZNF503-AS2A6NEH8 195 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 TMPOP42166 694 aaKnown RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 CALD1Q05682 793 aaKnown RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 MESP2Q0VG99 397 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 NFE2L2Q16236 605 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 MLANAQ16655 118 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 CCDC27Q2M243 656 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 PLEKHO1Q53GL0 409 aaPredicted RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 MCATQ8IVS2 390 aaKnown RBP5.97□□□□□ -1.45
CDR2-203ENST00000563573 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 RIN3Q8TB24 985 aa5.97□□□□□ -1.45
CDR2-203ENST00000563573 RAPGEF4Q8WZA2 1011 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms