RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 CCDC12Q8WUD4 166 aaPredicted RBP16.99■□□□□ 0.31
CDH11-207ENST00000563255 PHF20Q9BVI0 1012 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 PNMA2Q9UL42 364 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
CDH11-207ENST00000563255 STXBP3O00186 592 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 VWA5AO00534 786 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 PPP1R11O60927 126 aaPredicted RBP16.98■□□□□ 0.31
CDH11-207ENST00000563255 ZBED4O75132 1171 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 BRD1O95696 1058 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 MYCP01106 439 aaPredicted RBP16.98■□□□□ 0.31
CDH11-207ENST00000563255 OSBPP22059 807 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 PPP1R18Q6NYC8 613 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 FBXO11Q86XK2 927 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 CCDC148Q8NFR7 591 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 VPS54Q9P1Q0 977 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
CDH11-207ENST00000563255 KIAA0100Q14667 2235 aaKnown RBP16.98■□□□□ 0.31
CDH11-207ENST00000563255 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
CDH11-207ENST00000563255 ESYT2A0FGR8 921 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 SPDYE16A6NNV3 312 aaPredicted RBP16.97■□□□□ 0.31
CDH11-207ENST00000563255 MMP1P03956 469 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 ICAM1P05362 532 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 OAZ1P54368 228 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
CDH11-207ENST00000563255 PKP1Q13835 747 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
CDH11-207ENST00000563255 SHISA4Q96DD7 197 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 ATG4CQ96DT6 458 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 ASCC2Q9H1I8 757 aaPredicted RBP16.97■□□□□ 0.31
CDH11-207ENST00000563255 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
CDH11-207ENST00000563255 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 PTCH2Q9Y6C5 1203 aa16.97■□□□□ 0.31
CDH11-207ENST00000563255 ZNF536O15090 1300 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 VPS37CA5D8V6 355 aaPredicted RBP16.96■□□□□ 0.31
CDH11-207ENST00000563255 BTBD19C9JJ37 291 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 ZSCAN22P10073 491 aaPredicted RBP16.96■□□□□ 0.31
CDH11-207ENST00000563255 CALML3P27482 149 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 NAPAP54920 295 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 SNAP25P60880 206 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 KIF22Q14807 665 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 MB21D1Q8N884 522 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 REPS2Q8NFH8 660 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 COA7Q96BR5 231 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 P2RX7Q99572 595 aaKnown RBP16.96■□□□□ 0.31
CDH11-207ENST00000563255 ZMYND12Q9H0C1 365 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 CTDP1Q9Y5B0 961 aaPredicted RBP16.96■□□□□ 0.31
CDH11-207ENST00000563255 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
CDH11-207ENST00000563255 ABCB11O95342 1321 aa16.96■□□□□ 0.3
CDH11-207ENST00000563255 TLR2O60603 784 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
CDH11-207ENST00000563255 GNA11P29992 359 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 FOSBP53539 338 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 NLRP5P59047 1200 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 GUCY1B3Q02153 619 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDH11-207ENST00000563255 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
CDH11-207ENST00000563255 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 DAGLBQ8NCG7 672 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 GTF3C2Q8WUA4 911 aaPredicted RBP16.95■□□□□ 0.3
CDH11-207ENST00000563255 ZNF333Q96JL9 665 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
CDH11-207ENST00000563255 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 KCNJ14Q9UNX9 436 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 MYH7BA7E2Y1 1941 aa16.95■□□□□ 0.3
CDH11-207ENST00000563255 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 PDHXO00330 501 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 F13A1P00488 732 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 HERVK_113P62684 666 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 NPY5RQ15761 445 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 ARHGAP39Q9C0H5 1083 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 GLT8D2Q9H1C3 349 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 FOXP1Q9H334 677 aaPredicted RBP16.94■□□□□ 0.3
CDH11-207ENST00000563255 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
CDH11-207ENST00000563255 U2AF2P26368 475 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDH11-207ENST00000563255 KRT2P35908 639 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 LACTBP83111 547 aaPredicted RBP16.93■□□□□ 0.3
CDH11-207ENST00000563255 TMEM132BQ14DG7 1078 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 RAVER2Q9HCJ3 691 aaKnown RBP16.93■□□□□ 0.3
CDH11-207ENST00000563255 BRMS1Q9HCU9 246 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 RIC8AQ9NPQ8 531 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
CDH11-207ENST00000563255 CCPG1Q9ULG6 757 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 MRPL11Q9Y3B7 192 aaKnown RBP16.93■□□□□ 0.3
CDH11-207ENST00000563255 ZSWIM8A7E2V4 1837 aa16.93■□□□□ 0.3
CDH11-207ENST00000563255 M0R2N6 131 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 MRPL12P52815 198 aaKnown RBP16.92■□□□□ 0.3
CDH11-207ENST00000563255 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms