RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CCDC38Q502W7 563 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 RNF187Q5TA31 235 aaPredicted RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 PCNX4Q63HM2 1172 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 TWF2Q6IBS0 349 aaKnown RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 ARHGEF18Q6ZSZ5 1173 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 SH3BP5LQ7L8J4 393 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 MAATS1Q7Z4T9 603 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 FAM71BQ8TC56 605 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 RBM14Q96PK6 669 aaKnown RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 CFDP1Q9UEE9 299 aaPredicted RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 DSEQ9UL01 958 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 LRPPRCP42704 1394 aaKnown RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 GPR75-ASB3A0A0A6YYF3 556 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 A0A1B0GVL5 298 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 ANP32DO95626 131 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 ATP5JP18859 108 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 MZF1P28698 734 aaPredicted RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 CD97P48960 835 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 SLC27A3Q5K4L6 730 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 DUS1LQ6P1R4 473 aaKnown RBP10.35□□□□□ -0.75
CDH1-205ENST00000562836 Q6ZUG5 572 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 FAM20AQ96MK3 541 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 SRCIN1Q9C0H9 1055 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 ARHGEF38Q9NXL2 777 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 ZNF711Q9Y462 761 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 ASB3Q9Y575 518 aa10.35□□□□□ -0.75
CDH1-205ENST00000562836 DAPK1P53355 1430 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 A0A1W2PRQ8 180 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 GTPBP10A4D1E9 387 aaKnown RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 IGF2BP3O00425 579 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDH1-205ENST00000562836 STAMBPO95630 424 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 SLC4A1P02730 911 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 RPN1P04843 607 aaKnown RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 HAAOP46952 286 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 ITGB3BPQ13352 177 aaPredicted RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 GOT1L1Q8NHS2 421 aaPredicted RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 KLHDC4Q8TBB5 520 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 EPS8L3Q8TE67 593 aaKnown RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 GIMAP5Q96F15 307 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 SIKE1Q9BRV8 207 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 DNMT1P26358 1616 aaKnown RBP10.34□□□□□ -0.75
CDH1-205ENST00000562836 FGAP02671 866 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 PYGMP11217 842 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 KLHL30Q0D2K2 578 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 BRF1Q92994 677 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 EHD4Q9H223 541 aa10.34□□□□□ -0.75
CDH1-205ENST00000562836 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 EFCAB8A8MWE9 144 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 CDK2AP1O14519 115 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 N4BP3O15049 544 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 ATXN8OSP0DMR3 200 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 SRGNP10124 158 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 S100A1P23297 94 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 MAN1A1P33908 653 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 EVI2BP34910 448 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 SARSP49591 514 aaKnown RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 DSTNP60981 165 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 CYP26C1Q6V0L0 522 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 DSTYKQ6XUX3 929 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 HDXQ7Z353 690 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 MILR1Q7Z6M3 343 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 CNKSR1Q969H4 720 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 PAWRQ96IZ0 340 aaKnown RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 PRPF18Q99633 342 aaKnown RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 CARD6Q9BX69 1037 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDH1-205ENST00000562836 SEC63Q9UGP8 760 aaKnown RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 INTUQ9ULD6 942 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 ZBTB1Q9Y2K1 713 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 NOX1Q9Y5S8 564 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 USP47Q96K76 1375 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 GAPVD1Q14C86 1478 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 OXSR1O95747 527 aaPredicted RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 TMOD1P28289 359 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 TNNI2P48788 182 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 NR2C2P49116 596 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 B2MP61769 119 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 DR1Q01658 176 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 GNA13Q14344 377 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 BCL2A1Q16548 175 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 GPR161Q8N6U8 529 aaKnown RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 C8orf76Q96K31 380 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 CGREF1Q99674 301 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 MOV10L1Q9BXT6 1211 aaKnown RBP10.33□□□□□ -0.76
CDH1-205ENST00000562836 SNX25Q9H3E2 840 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 PPCSQ9HAB8 311 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 POLG2Q9UHN1 485 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 ATPIF1Q9UII2 106 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 KIF14Q15058 1648 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms