RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.19
IFT140-205ENST00000561954 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.19
IFT140-205ENST00000561954 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
IFT140-205ENST00000561954 USP6NLQ92738 828 aa16.21■□□□□ 0.19
IFT140-205ENST00000561954 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
IFT140-205ENST00000561954 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
IFT140-205ENST00000561954 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
IFT140-205ENST00000561954 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
IFT140-205ENST00000561954 RBBP6Q7Z6E9 1792 aaKnown RBP16.21■□□□□ 0.18
IFT140-205ENST00000561954 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 hCG_1984214I3L0E3 225 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 ST18O60284 1047 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 CDKL5O76039 1030 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 PDIA3P30101 505 aaKnown RBP16.2■□□□□ 0.18
IFT140-205ENST00000561954 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 SRBD1Q8N5C6 995 aaKnown RBP16.2■□□□□ 0.18
IFT140-205ENST00000561954 ZNF713Q8N859 430 aaPredicted RBP16.2■□□□□ 0.18
IFT140-205ENST00000561954 DDX11Q96FC9 970 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 PIGSQ96S52 555 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 HPS5Q9UPZ3 1129 aa16.2■□□□□ 0.18
IFT140-205ENST00000561954 CPLX1O14810 134 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 ADCY3O60266 1144 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 HMGCRP04035 888 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 GRK4P32298 578 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 MCF2L2Q86YR7 1114 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 A1CFQ9NQ94 594 aaKnown RBP16.19■□□□□ 0.18
IFT140-205ENST00000561954 DIS3Q9Y2L1 958 aaKnown RBP16.19■□□□□ 0.18
IFT140-205ENST00000561954 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
IFT140-205ENST00000561954 CYP2B6P20813 491 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 UBXN2AP68543 259 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
IFT140-205ENST00000561954 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 OLFML2BQ68BL8 750 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 PPP1R18Q6NYC8 613 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 KIF2CQ99661 725 aa16.18■□□□□ 0.18
IFT140-205ENST00000561954 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
IFT140-205ENST00000561954 POTEB2H3BUK9 544 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 NFIBO00712 420 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 IFNAR1P17181 557 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 CDC27P30260 824 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 MUM1L1Q5H9M0 696 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 NSMFQ6X4W1 530 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
IFT140-205ENST00000561954 TEX2Q8IWB9 1127 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
IFT140-205ENST00000561954 MSL3Q8N5Y2 521 aaKnown RBP16.17■□□□□ 0.18
IFT140-205ENST00000561954 SAMD3Q8N6K7 520 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 ARMC5Q96C12 935 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 MPHOSPH6Q99547 160 aaKnown RBP16.17■□□□□ 0.18
IFT140-205ENST00000561954 RNF26Q9BY78 433 aaPredicted RBP16.17■□□□□ 0.18
IFT140-205ENST00000561954 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
IFT140-205ENST00000561954 CYP39A1Q9NYL5 469 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
IFT140-205ENST00000561954 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 PTPDC1A2A3K4 754 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 PFKFB2O60825 505 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 PPP1R11O60927 126 aaPredicted RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 ADD1P35611 737 aaKnown RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 CCT2P78371 535 aaKnown RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 FUT2Q10981 343 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 STK3Q13188 491 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 RNF207Q6ZRF8 634 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 CCDC82Q8N4S0 544 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 PIBF1Q8WXW3 757 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 MAML3Q96JK9 1138 aa16.16■□□□□ 0.18
IFT140-205ENST00000561954 MAP3K20Q9NYL2 800 aaKnown RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 BIN2Q9UBW5 565 aaPredicted RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
IFT140-205ENST00000561954 COBLO75128 1261 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 INHAP05111 366 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 PGK2P07205 417 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 ELNP15502 786 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 TAL1P17542 331 aaPredicted RBP16.15■□□□□ 0.18
IFT140-205ENST00000561954 MCM2P49736 904 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 GHRHRQ02643 423 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
IFT140-205ENST00000561954 HEATR3Q7Z4Q2 680 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 CCDC12Q8WUD4 166 aaPredicted RBP16.15■□□□□ 0.18
IFT140-205ENST00000561954 TRIB2Q92519 343 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 GTF3C6Q969F1 213 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 NCOA5Q9HCD5 579 aaKnown RBP16.15■□□□□ 0.18
IFT140-205ENST00000561954 SH2B1Q9NRF2 756 aaPredicted RBP16.15■□□□□ 0.18
IFT140-205ENST00000561954 LIMCH1Q9UPQ0 1083 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 SYNGAP1Q96PV0 1343 aa16.15■□□□□ 0.18
IFT140-205ENST00000561954 B4DLN1 442 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
IFT140-205ENST00000561954 RPS6P62753 249 aaKnown RBP16.14■□□□□ 0.17
IFT140-205ENST00000561954 SCRN1Q12765 414 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 NPLOC4Q8TAT6 608 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms