RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 PIGSQ96S52 555 aa27.19■■□□□ 1.94
SMPD3-202ENST00000561749 A1CFQ9NQ94 594 aaKnown RBP27.19■■□□□ 1.94
SMPD3-202ENST00000561749 NFIBO00712 420 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 ZBTB43O43298 467 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 ZNF792Q3KQV3 632 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.18■■□□□ 1.94
SMPD3-202ENST00000561749 FANCBQ8NB91 859 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 MAML3Q96JK9 1138 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 TM6SF1Q9BZW5 370 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 RIOX1Q9H6W3 641 aa27.18■■□□□ 1.94
SMPD3-202ENST00000561749 PRKAR2AP13861 404 aaKnown RBP27.17■■□□□ 1.94
SMPD3-202ENST00000561749 CYP2C19P33261 490 aa27.17■■□□□ 1.94
SMPD3-202ENST00000561749 FBXO11Q86XK2 927 aa27.17■■□□□ 1.94
SMPD3-202ENST00000561749 CLEC4DQ8WXI8 215 aa27.17■■□□□ 1.94
SMPD3-202ENST00000561749 MTMR8Q96EF0 704 aa27.17■■□□□ 1.94
SMPD3-202ENST00000561749 TMEM106CQ9BVX2 250 aa27.17■■□□□ 1.94
SMPD3-202ENST00000561749 RNF208Q9H0X6 261 aa27.17■■□□□ 1.94
SMPD3-202ENST00000561749 KIAA0100Q14667 2235 aaKnown RBP27.16■■□□□ 1.94
SMPD3-202ENST00000561749 DNAJC25-GNG10A0A024R161 153 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 POTEFA5A3E0 1075 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 GOLGA8AA7E2F4 631 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 GOLGA8BA8MQT2 603 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 PPP1R11O60927 126 aaPredicted RBP27.16■■□□□ 1.94
SMPD3-202ENST00000561749 CNTN2Q02246 1040 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 CACNB2Q08289 660 aaPredicted RBP27.16■■□□□ 1.94
SMPD3-202ENST00000561749 MFSD14CQ5VZR4 134 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 SRBD1Q8N5C6 995 aaKnown RBP27.16■■□□□ 1.94
SMPD3-202ENST00000561749 PNMA2Q9UL42 364 aa27.16■■□□□ 1.94
SMPD3-202ENST00000561749 ZBTB5O15062 677 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 GNAQP50148 359 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 ANAPC15P60006 121 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 RTN1Q16799 776 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 OLFML2BQ68BL8 750 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 CCDC82Q8N4S0 544 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 LARP6Q9BRS8 491 aaKnown RBP27.15■■□□□ 1.94
SMPD3-202ENST00000561749 ABCB11O95342 1321 aa27.15■■□□□ 1.94
SMPD3-202ENST00000561749 PTPDC1A2A3K4 754 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 POTEB2H3BUK9 544 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 TOB2Q14106 344 aaPredicted RBP27.14■■□□□ 1.94
SMPD3-202ENST00000561749 IFFO2Q5TF58 517 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 TMTC3Q6ZXV5 915 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 FGD4Q96M96 766 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 LZTS2Q9BRK4 669 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 SPZ1Q9BXG8 430 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 AMNQ9BXJ7 453 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 AGXT2Q9BYV1 514 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 PDRG1Q9NUG6 133 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 CYP39A1Q9NYL5 469 aa27.14■■□□□ 1.94
SMPD3-202ENST00000561749 PFASO15067 1338 aa27.14■■□□□ 1.93
SMPD3-202ENST00000561749 CCND3P30281 292 aaPredicted RBP27.13■■□□□ 1.93
SMPD3-202ENST00000561749 BAATQ14032 418 aaPredicted RBP27.13■■□□□ 1.93
SMPD3-202ENST00000561749 MAP3K21Q5TCX8 1036 aa27.13■■□□□ 1.93
SMPD3-202ENST00000561749 SLC30A10Q6XR72 485 aa27.13■■□□□ 1.93
SMPD3-202ENST00000561749 PURBQ96QR8 312 aaKnown RBP27.13■■□□□ 1.93
SMPD3-202ENST00000561749 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.13■■□□□ 1.93
SMPD3-202ENST00000561749 HMX1Q9NP08 348 aaPredicted RBP27.13■■□□□ 1.93
SMPD3-202ENST00000561749 DIS3Q9Y2L1 958 aaKnown RBP27.13■■□□□ 1.93
SMPD3-202ENST00000561749 FRMPD3Q5JV73 1810 aa27.13■■□□□ 1.93
SMPD3-202ENST00000561749 hCG_1642624A0A1W2PR95 340 aa27.12■■□□□ 1.93
SMPD3-202ENST00000561749 IGHA2P01877 340 aa27.12■■□□□ 1.93
SMPD3-202ENST00000561749 PRAMEF19Q5SWL8 479 aa27.12■■□□□ 1.93
SMPD3-202ENST00000561749 FBXL16Q8N461 479 aa27.12■■□□□ 1.93
SMPD3-202ENST00000561749 FAM133AQ8N9E0 248 aa27.12■■□□□ 1.93
SMPD3-202ENST00000561749 RRP36Q96EU6 259 aaKnown RBP27.12■■□□□ 1.93
SMPD3-202ENST00000561749 RBM28Q9NW13 759 aaKnown RBP27.12■■□□□ 1.93
SMPD3-202ENST00000561749 RPTORQ8N122 1335 aa27.12■■□□□ 1.93
SMPD3-202ENST00000561749 PNMA6FA0A0J9YX94 578 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 CALML3P27482 149 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 CDC27P30260 824 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 METAP2P50579 478 aaKnown RBP eCLIP27.11■■□□□ 1.93
SMPD3-202ENST00000561749 RNF207Q6ZRF8 634 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 TRPV1Q8NER1 839 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 TBC1D5Q92609 795 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 TINF2Q9BSI4 451 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 FAM217BQ9NTX9 383 aaPredicted RBP27.11■■□□□ 1.93
SMPD3-202ENST00000561749 PCDHA1Q9Y5I3 950 aa27.11■■□□□ 1.93
SMPD3-202ENST00000561749 SOWAHBA6NEL2 793 aa27.1■■□□□ 1.93
SMPD3-202ENST00000561749 EN2P19622 333 aaPredicted RBP27.1■■□□□ 1.93
SMPD3-202ENST00000561749 SMARCA1P28370 1054 aa27.1■■□□□ 1.93
SMPD3-202ENST00000561749 DEFB118Q96PH6 123 aa27.1■■□□□ 1.93
SMPD3-202ENST00000561749 MRPL11Q9Y3B7 192 aaKnown RBP27.1■■□□□ 1.93
SMPD3-202ENST00000561749 DDX49Q9Y6V7 483 aaKnown RBP27.1■■□□□ 1.93
SMPD3-202ENST00000561749 CNGA1P29973 690 aa27.09■■□□□ 1.93
SMPD3-202ENST00000561749 RPS6P62753 249 aaKnown RBP27.09■■□□□ 1.93
SMPD3-202ENST00000561749 PAK6Q9NQU5 681 aaPredicted RBP27.09■■□□□ 1.93
SMPD3-202ENST00000561749 SEC63Q9UGP8 760 aaKnown RBP27.09■■□□□ 1.93
SMPD3-202ENST00000561749 ASTN1O14525 1302 aa27.09■■□□□ 1.93
SMPD3-202ENST00000561749 CNTNAP5Q8WYK1 1306 aa27.09■■□□□ 1.93
SMPD3-202ENST00000561749 LRRC37A2A6NM11 1700 aa27.08■■□□□ 1.93
SMPD3-202ENST00000561749 CENPFP49454 3210 aa27.08■■□□□ 1.93
SMPD3-202ENST00000561749 GJB1P08034 283 aa27.08■■□□□ 1.93
SMPD3-202ENST00000561749 CYBAP13498 195 aa27.08■■□□□ 1.93
SMPD3-202ENST00000561749 ADD1P35611 737 aaKnown RBP27.08■■□□□ 1.93
SMPD3-202ENST00000561749 RCAN1P53805 252 aa27.08■■□□□ 1.93
SMPD3-202ENST00000561749 PDIA3P30101 505 aaKnown RBP27.07■■□□□ 1.92
SMPD3-202ENST00000561749 CCT2P78371 535 aaKnown RBP27.07■■□□□ 1.92
SMPD3-202ENST00000561749 ZNF467Q7Z7K2 595 aaPredicted RBP27.07■■□□□ 1.92
SMPD3-202ENST00000561749 U2AF1L4Q8WU68 220 aaKnown RBP27.07■■□□□ 1.92
SMPD3-202ENST00000561749 IL17RAQ96F46 866 aa27.07■■□□□ 1.92
SMPD3-202ENST00000561749 OPLAHO14841 1288 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms