RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 ZCCHC17Q9NP64 241 aaKnown RBP22.72■■□□□ 1.23
RPUSD1-202ENST00000561734 RAB21Q9UL25 225 aa22.72■■□□□ 1.23
RPUSD1-202ENST00000561734 GUCA1BQ9UMX6 200 aa22.72■■□□□ 1.23
RPUSD1-202ENST00000561734 BTAF1O14981 1849 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 SMCO2A6NFE2 343 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 AMPD2Q01433 879 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 SEMA3FQ13275 785 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 C16orf86Q6ZW13 317 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 CSGALNACT2Q8N6G5 542 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 TRIM9Q9C026 710 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 MAGEF1Q9HAY2 307 aa22.71■■□□□ 1.23
RPUSD1-202ENST00000561734 DDX60LQ5H9U9 1706 aaKnown RBP22.7■■□□□ 1.23
RPUSD1-202ENST00000561734 POTEB2H3BUK9 544 aa22.7■■□□□ 1.23
RPUSD1-202ENST00000561734 NOC3LQ8WTT2 800 aaKnown RBP22.7■■□□□ 1.23
RPUSD1-202ENST00000561734 TUBGCP2Q9BSJ2 902 aa22.7■■□□□ 1.23
RPUSD1-202ENST00000561734 ZNF287Q9HBT7 754 aa22.7■■□□□ 1.23
RPUSD1-202ENST00000561734 MYH1P12882 1939 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 SRGNP10124 158 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 DNM2P50570 870 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 PDE4DQ08499 809 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 HNRNPLLQ8WVV9 542 aaKnown RBP22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 P2RX5Q93086 422 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 EXOC1Q9NV70 894 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 MYO6Q9UM54 1294 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 TFR2Q9UP52 801 aa22.7■■□□□ 1.22
RPUSD1-202ENST00000561734 CTAGE15A4D2H0 777 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 RHOXF2BP0C7M4 288 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 CTAGE8P0CG41 777 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 HERVK_113P62684 666 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 ASIC1P78348 528 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 STK4Q13043 487 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 BEND6Q5SZJ8 279 aaPredicted RBP22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 ANKRD40Q6AI12 368 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 NEK8Q86SG6 692 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 CTAGE6Q86UF2 777 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 CTAGE4Q8IX94 777 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 RHOXF2Q9BQY4 288 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 C6orf50Q9HD87 102 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 MAP2K7O14733 419 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 FCER1AP12319 257 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 CCNE1P24864 410 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 TECP42680 631 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 KLK7P49862 253 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 GPSM2P81274 684 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 TSR1Q2NL82 804 aaKnown RBP22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 NCAPH2Q6IBW4 605 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 NEDD1Q8NHV4 660 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 RRP36Q96EU6 259 aaKnown RBP22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 C7orf25Q9BPX7 421 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 TTYH3Q9C0H2 523 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 VAT1LQ9HCJ6 419 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 AGPAT5Q9NUQ2 364 aa22.69■■□□□ 1.22
RPUSD1-202ENST00000561734 CDK5RAP2Q96SN8 1893 aa22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 RASSF10A6NK89 507 aa22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 GNA11P29992 359 aa22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 RFC4P35249 363 aa22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 CEP95Q96GE4 821 aa22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 CNOT6LQ96LI5 555 aaKnown RBP22.68■■□□□ 1.22
RPUSD1-202ENST00000561734 TUBB4BP68371 445 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 VPS72Q15906 364 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 CNBD1Q8NA66 436 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 TBCKQ8TEA7 893 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 CCDC47Q96A33 483 aaKnown RBP22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 PIGSQ96S52 555 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 MMTAG2Q9BU76 263 aaKnown RBP22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 HAUS4Q9H6D7 363 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 SEC63Q9UGP8 760 aaKnown RBP22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 GPR75-ASB3A0A0A6YYF3 556 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 BICDL2A1A5D9 508 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 MEA1Q16626 185 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 SOGA3Q5TF21 947 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 C15orf52Q6ZUT6 534 aaKnown RBP22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 NOA1Q8NC60 698 aaKnown RBP22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 CD209Q9NNX6 404 aa22.67■■□□□ 1.22
RPUSD1-202ENST00000561734 H3BQF6 201 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 TRIM21P19474 475 aaKnown RBP22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 ST5P78524 1137 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 HPS3Q969F9 1004 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 BIN2Q9UBW5 565 aaPredicted RBP22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 CCDC66A2RUB6 948 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 PSMD14O00487 310 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 ENC1O14682 589 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 UFL1O94874 794 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 VSNL1P62760 191 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 TBC1D8BQ0IIM8 1120 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 CCDC122Q5T0U0 273 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 ABCB6Q9NP58 842 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 TMEM260Q9NX78 707 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 HDAC6Q9UBN7 1215 aa22.66■■□□□ 1.22
RPUSD1-202ENST00000561734 NKRFO15226 690 aaKnown RBP eCLIP22.65■■□□□ 1.22
RPUSD1-202ENST00000561734 MIIPQ5JXC2 388 aa22.65■■□□□ 1.22
RPUSD1-202ENST00000561734 TRAPPC11Q7Z392 1133 aa22.65■■□□□ 1.22
RPUSD1-202ENST00000561734 CERS3Q8IU89 383 aa22.65■■□□□ 1.22
RPUSD1-202ENST00000561734 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms