RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 MKNK2Q9HBH9 465 aa21.8■■□□□ 1.08
COMMD4-204ENST00000561662 NYAP2Q9P242 653 aa21.8■■□□□ 1.08
COMMD4-204ENST00000561662 GNEQ9Y223 722 aaKnown RBP21.8■■□□□ 1.08
COMMD4-204ENST00000561662 SOWAHBA6NEL2 793 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 GTPBP6O43824 516 aaPredicted RBP21.79■■□□□ 1.08
COMMD4-204ENST00000561662 ARHGEF15O94989 841 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 CYP2C9P11712 490 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 TMEM31Q5JXX7 168 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 C20orf194Q5TEA3 1177 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 LRRC47Q8N1G4 583 aaKnown RBP21.79■■□□□ 1.08
COMMD4-204ENST00000561662 CHST13Q8NET6 341 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 PPP1R13LQ8WUF5 828 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 AGBL1Q96MI9 1066 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.79■■□□□ 1.08
COMMD4-204ENST00000561662 TRMT13Q9NUP7 481 aaKnown RBP21.79■■□□□ 1.08
COMMD4-204ENST00000561662 FBXO40Q9UH90 709 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 TRANK1O15050 2925 aa21.79■■□□□ 1.08
COMMD4-204ENST00000561662 MINDY4BA8MYZ0 360 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 PRDM1O75626 825 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 CABYRO75952 493 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 NKX3-2P78367 333 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 HSP90AB4PQ58FF6 505 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 FBXO16Q8IX29 292 aaPredicted RBP21.78■■□□□ 1.08
COMMD4-204ENST00000561662 FAM133AQ8N9E0 248 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 ARNTL2Q8WYA1 636 aa21.78■■□□□ 1.08
COMMD4-204ENST00000561662 GREB1LQ9C091 1923 aaPredicted RBP21.78■■□□□ 1.08
COMMD4-204ENST00000561662 TLL1O43897 1013 aa21.77■■□□□ 1.08
COMMD4-204ENST00000561662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.77■■□□□ 1.08
COMMD4-204ENST00000561662 SPRED2Q7Z698 418 aa21.77■■□□□ 1.08
COMMD4-204ENST00000561662 PANK1Q8TE04 598 aa21.77■■□□□ 1.08
COMMD4-204ENST00000561662 KIF1BPQ96EK5 621 aa21.77■■□□□ 1.08
COMMD4-204ENST00000561662 A1CFQ9NQ94 594 aaKnown RBP21.77■■□□□ 1.08
COMMD4-204ENST00000561662 ARPP21Q9UBL0 812 aaPredicted RBP21.77■■□□□ 1.08
COMMD4-204ENST00000561662 FEM1BQ9UK73 627 aa21.77■■□□□ 1.08
COMMD4-204ENST00000561662 SNAP25P60880 206 aa21.76■■□□□ 1.07
COMMD4-204ENST00000561662 ALDH8A1Q9H2A2 487 aaPredicted RBP21.76■■□□□ 1.07
COMMD4-204ENST00000561662 ACAD9Q9H845 621 aa21.76■■□□□ 1.07
COMMD4-204ENST00000561662 C11orf16Q9NQ32 467 aa21.76■■□□□ 1.07
COMMD4-204ENST00000561662 RNF146Q9NTX7 359 aa21.76■■□□□ 1.07
COMMD4-204ENST00000561662 COG6Q9Y2V7 657 aa21.76■■□□□ 1.07
COMMD4-204ENST00000561662 LRRC37A2A6NM11 1700 aa21.75■■□□□ 1.07
COMMD4-204ENST00000561662 ZEB2O60315 1214 aa21.75■■□□□ 1.07
COMMD4-204ENST00000561662 UBE3CQ15386 1083 aa21.75■■□□□ 1.07
COMMD4-204ENST00000561662 CEP95Q96GE4 821 aa21.75■■□□□ 1.07
COMMD4-204ENST00000561662 PURBQ96QR8 312 aaKnown RBP21.75■■□□□ 1.07
COMMD4-204ENST00000561662 SCN5AQ14524 2016 aa21.75■■□□□ 1.07
COMMD4-204ENST00000561662 TMEM232C9JQI7 657 aa21.74■■□□□ 1.07
COMMD4-204ENST00000561662 RBAK-RBAKDNI3L0D1 243 aa21.74■■□□□ 1.07
COMMD4-204ENST00000561662 HLA-CQ95604 372 aa21.74■■□□□ 1.07
COMMD4-204ENST00000561662 HAUS7Q99871 368 aa21.74■■□□□ 1.07
COMMD4-204ENST00000561662 MYH4Q9Y623 1939 aa21.74■■□□□ 1.07
COMMD4-204ENST00000561662 IGKV6D-41A0A0C4DH26 115 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 ASB14A6NK59 587 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 ALAS1P13196 640 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 ATP5JP18859 108 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 TAP1Q03518 808 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 IKQ13123 557 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-204ENST00000561662 SLFN13Q68D06 897 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 TAPT1Q6NXT6 567 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 TRERF1Q96PN7 1200 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 CD320Q9NPF0 282 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 COG5Q9UP83 839 aa21.73■■□□□ 1.07
COMMD4-204ENST00000561662 GSG1L2A8MUP6 293 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 BMP3P12645 472 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 POU3F3P20264 500 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-204ENST00000561662 OAZ1P54368 228 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 STRBPQ96SI9 672 aaKnown RBP21.72■■□□□ 1.07
COMMD4-204ENST00000561662 MTMR4Q9NYA4 1195 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 ZNF536O15090 1300 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 TNKSO95271 1327 aa21.72■■□□□ 1.07
COMMD4-204ENST00000561662 MYL3P08590 195 aa21.71■■□□□ 1.07
COMMD4-204ENST00000561662 MS4A1P11836 297 aa21.71■■□□□ 1.07
COMMD4-204ENST00000561662 GRB10Q13322 594 aa21.71■■□□□ 1.07
COMMD4-204ENST00000561662 SBK1Q52WX2 424 aa21.71■■□□□ 1.07
COMMD4-204ENST00000561662 MUM1L1Q5H9M0 696 aa21.71■■□□□ 1.07
COMMD4-204ENST00000561662 FAM47CQ5HY64 1035 aa21.71■■□□□ 1.07
COMMD4-204ENST00000561662 ALYREFQ86V81 257 aaKnown RBP21.71■■□□□ 1.07
COMMD4-204ENST00000561662 MYH7P12883 1935 aa21.7■■□□□ 1.07
COMMD4-204ENST00000561662 IQSEC1Q6DN90 963 aa21.7■■□□□ 1.06
COMMD4-204ENST00000561662 RASGRP2Q7LDG7 609 aa21.7■■□□□ 1.06
COMMD4-204ENST00000561662 TMCO2Q7Z6W1 182 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-204ENST00000561662 SIRT2Q8IXJ6 389 aa21.7■■□□□ 1.06
COMMD4-204ENST00000561662 ZNF444Q8N0Y2 327 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-204ENST00000561662 FTOQ9C0B1 505 aaKnown RBP eCLIP21.7■■□□□ 1.06
COMMD4-204ENST00000561662 EPB41L4AQ9HCS5 686 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-204ENST00000561662 ARIH1Q9Y4X5 557 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-204ENST00000561662 MUC6Q6W4X9 2439 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 TTLL1O95922 423 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 PFKMP08237 780 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 ACTN1P12814 892 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 NSMFQ6X4W1 530 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 HERC6Q8IVU3 1022 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 GMCL1P1Q8NEA9 526 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 MKL1Q969V6 931 aa21.69■■□□□ 1.06
COMMD4-204ENST00000561662 GPR37L1O60883 481 aa21.68■■□□□ 1.06
COMMD4-204ENST00000561662 MCCP23508 829 aa21.68■■□□□ 1.06
COMMD4-204ENST00000561662 STAT2P52630 851 aa21.68■■□□□ 1.06
COMMD4-204ENST00000561662 IRX6P78412 446 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms