RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CPA1P15085 419 aa23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 RXRAP19793 462 aa23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 CTCFLQ8NI51 663 aaPredicted RBP23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 CYP39A1Q9NYL5 469 aa23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 HOMER1Q86YM7 354 aa23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 SLC12A7Q9Y666 1083 aa23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 EXOSC10Q01780 885 aaKnown RBP23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 CCDC144CPQ8IYA2 1237 aa23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 CLEC4DQ8WXI8 215 aa23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 FGD4Q96M96 766 aa23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 USP26Q9BXU7 913 aa23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 CRISPLD2Q9H0B8 497 aa23.17■■□□□ 1.3
TSPAN3-210ENST00000561277 MYH6P13533 1939 aa23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 PTPDC1A2A3K4 754 aa23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 EPB41L2O43491 1005 aaKnown RBP23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 SLC35G1Q2M3R5 365 aa23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 MICU3Q86XE3 530 aa23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 FBXO11Q86XK2 927 aa23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 FAM133AQ8N9E0 248 aa23.16■■□□□ 1.3
TSPAN3-210ENST00000561277 KIF5BP33176 963 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 FGD1P98174 961 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 BAATQ14032 418 aaPredicted RBP23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 SLC30A10Q6XR72 485 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 ZNF467Q7Z7K2 595 aaPredicted RBP23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 PIBF1Q8WXW3 757 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 MAP3K14Q99558 947 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 DDX20Q9UHI6 824 aaKnown RBP23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 CNPY2Q9Y2B0 182 aa23.15■■□□□ 1.3
TSPAN3-210ENST00000561277 CYTH3O43739 400 aa23.14■■□□□ 1.3
TSPAN3-210ENST00000561277 FARP2O94887 1054 aaPredicted RBP23.14■■□□□ 1.3
TSPAN3-210ENST00000561277 ANO1Q5XXA6 986 aa23.14■■□□□ 1.3
TSPAN3-210ENST00000561277 PURBQ96QR8 312 aaKnown RBP23.14■■□□□ 1.3
TSPAN3-210ENST00000561277 PIGSQ96S52 555 aa23.14■■□□□ 1.3
TSPAN3-210ENST00000561277 SOWAHBA6NEL2 793 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 ZBTB5O15062 677 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 CALM1P0DP23 149 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 CALM2P0DP24 149 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 CALM3P0DP25 149 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 CASTP20810 708 aaKnown RBP23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 CALML3P27482 149 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 LHX8Q68G74 356 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 MAMDC4Q6UXC1 1216 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 SYNE3Q6ZMZ3 975 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 RNF207Q6ZRF8 634 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 MSL3Q8N5Y2 521 aaKnown RBP23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 AMNQ9BXJ7 453 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 RIOX1Q9H6W3 641 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 ABCB11O95342 1321 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 SYNGAP1Q96PV0 1343 aa23.14■■□□□ 1.29
TSPAN3-210ENST00000561277 FRMPD3Q5JV73 1810 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 SEPT4O43236 478 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 PPP1R11O60927 126 aaPredicted RBP23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 ARMCX2Q7L311 632 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 MTMR8Q96EF0 704 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 ZHX1Q9UKY1 873 aaPredicted RBP23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 OGDHLQ9ULD0 1010 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 ASTN1O14525 1302 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 LCTP09848 1927 aa23.13■■□□□ 1.29
TSPAN3-210ENST00000561277 MCM3APO60318 1980 aa23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 MSCO60682 206 aa23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 PLEKHA8P1O95397 391 aa23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 SNAI1O95863 264 aaPredicted RBP23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 PSMA5P28066 241 aa23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 RPS6P62753 249 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 APOA5Q6Q788 366 aa23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 BAZ2BQ9UIF8 2168 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 NAP1L2Q9ULW6 460 aaPredicted RBP23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 DDX49Q9Y6V7 483 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-210ENST00000561277 RPS6KB1P23443 525 aa23.11■■□□□ 1.29
TSPAN3-210ENST00000561277 Q6ZUG5 572 aa23.11■■□□□ 1.29
TSPAN3-210ENST00000561277 CMTR1Q8N1G2 835 aaKnown RBP23.11■■□□□ 1.29
TSPAN3-210ENST00000561277 DIS3LQ8TF46 1054 aaKnown RBP23.11■■□□□ 1.29
TSPAN3-210ENST00000561277 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
TSPAN3-210ENST00000561277 MRPL11Q9Y3B7 192 aaKnown RBP23.11■■□□□ 1.29
TSPAN3-210ENST00000561277 KLF18A0A0U1RQI7 1052 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 GNAQP50148 359 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 FANCBQ8NB91 859 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 PCDHA1Q9Y5I3 950 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 ASB14A6NK59 587 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 ZBTB43O43298 467 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 ZNF865P0CJ78 1059 aaPredicted RBP23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 CAPN2P17655 700 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 UBE2Q1Q7Z7E8 422 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 CCDC82Q8N4S0 544 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 SRBD1Q8N5C6 995 aaKnown RBP23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 BRF1Q92994 677 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 PAWRQ96IZ0 340 aaKnown RBP23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 LZTS2Q9BRK4 669 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 SPZ1Q9BXG8 430 aa23.1■■□□□ 1.29
TSPAN3-210ENST00000561277 PNMA6FA0A0J9YX94 578 aa23.09■■□□□ 1.29
TSPAN3-210ENST00000561277 MYCNP04198 464 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-210ENST00000561277 ACVR2BQ13705 512 aa23.09■■□□□ 1.29
TSPAN3-210ENST00000561277 ANKLE1Q8NAG6 615 aa23.09■■□□□ 1.29
TSPAN3-210ENST00000561277 TBC1D5Q92609 795 aa23.09■■□□□ 1.29
TSPAN3-210ENST00000561277 LENG1Q96BZ8 264 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms