RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MRVI1Q9Y6F6 885 aa19.46■□□□□ 0.71
HDDC3-206ENST00000561036 VWA3AA6NCI4 1184 aa19.45■□□□□ 0.7
HDDC3-206ENST00000561036 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
HDDC3-206ENST00000561036 GCFC2P16383 781 aaKnown RBP19.45■□□□□ 0.7
HDDC3-206ENST00000561036 LETM2Q2VYF4 491 aa19.45■□□□□ 0.7
HDDC3-206ENST00000561036 CNNM3Q8NE01 707 aa19.45■□□□□ 0.7
HDDC3-206ENST00000561036 ZC3H15Q8WU90 426 aaKnown RBP19.45■□□□□ 0.7
HDDC3-206ENST00000561036 KLRG1Q96E93 195 aa19.45■□□□□ 0.7
HDDC3-206ENST00000561036 WRNIP1Q96S55 665 aa19.45■□□□□ 0.7
HDDC3-206ENST00000561036 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.45■□□□□ 0.7
HDDC3-206ENST00000561036 NEMFO60524 1076 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 CCNT1O60563 726 aaKnown RBP19.44■□□□□ 0.7
HDDC3-206ENST00000561036 GPR162Q16538 588 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 LONRF3Q496Y0 759 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 SPECC1Q5M775 1068 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 PPP4R3AQ6IN85 833 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 FAM200AQ8TCP9 573 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 SYMPKQ92797 1274 aaKnown RBP19.44■□□□□ 0.7
HDDC3-206ENST00000561036 AK8Q96MA6 479 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 ANO10Q9NW15 660 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 PNMA2Q9UL42 364 aa19.44■□□□□ 0.7
HDDC3-206ENST00000561036 PIK3CDO00329 1044 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 POLR2DO15514 142 aaKnown RBP19.43■□□□□ 0.7
HDDC3-206ENST00000561036 OR52Z1P0C646 297 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 PTPRAP18433 802 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 TXLNAP40222 546 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 USP11P51784 963 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 ZRSR1Q15695 479 aaKnown RBP19.43■□□□□ 0.7
HDDC3-206ENST00000561036 ZYXQ15942 572 aaKnown RBP19.43■□□□□ 0.7
HDDC3-206ENST00000561036 IL17AQ16552 155 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 UBE2SQ16763 222 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 SULF1Q8IWU6 871 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 PRPF38AQ8NAV1 312 aaKnown RBP19.43■□□□□ 0.7
HDDC3-206ENST00000561036 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 ZNF280CQ8ND82 737 aa19.43■□□□□ 0.7
HDDC3-206ENST00000561036 MRPL11Q9Y3B7 192 aaKnown RBP19.43■□□□□ 0.7
HDDC3-206ENST00000561036 SSC5DA1L4H1 1573 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 MEIS2O14770 477 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 FDX1P10109 184 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 BACE1P56817 501 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 ANO6Q4KMQ2 910 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 MOXD1Q6UVY6 613 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 CCDC84Q86UT8 332 aaPredicted RBP19.42■□□□□ 0.7
HDDC3-206ENST00000561036 KIFC2Q96AC6 838 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 C12orf42Q96LP6 360 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 SLF1Q9BQI6 1058 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 PANK2Q9BZ23 570 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 TMEM60Q9H2L4 133 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 TUBE1Q9UJT0 475 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 ABCB11O95342 1321 aa19.42■□□□□ 0.7
HDDC3-206ENST00000561036 ACTN4O43707 911 aaKnown RBP19.41■□□□□ 0.7
HDDC3-206ENST00000561036 SLFN14P0C7P3 912 aa19.41■□□□□ 0.7
HDDC3-206ENST00000561036 SNAP25P60880 206 aa19.41■□□□□ 0.7
HDDC3-206ENST00000561036 MDM2Q00987 491 aaPredicted RBP19.41■□□□□ 0.7
HDDC3-206ENST00000561036 USP49Q70CQ1 688 aa19.41■□□□□ 0.7
HDDC3-206ENST00000561036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.41■□□□□ 0.7
HDDC3-206ENST00000561036 EPSTI1Q96J88 318 aa19.41■□□□□ 0.7
HDDC3-206ENST00000561036 NAT10Q9H0A0 1025 aaKnown RBP19.41■□□□□ 0.7
HDDC3-206ENST00000561036 EMILIN3Q9NT22 766 aa19.41■□□□□ 0.7
HDDC3-206ENST00000561036 CYP3A7-CYP3A51PA0A087WV96 503 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 GLTPD2A6NH11 291 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L15C9J2P7 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L13C9JLJ4 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L11C9JVI0 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L18D6R9N7 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L22D6RA61 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L17D6RBQ6 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L19D6RCP7 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L20D6RJB6 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP2O75604 605 aaPredicted RBP19.4■□□□□ 0.7
HDDC3-206ENST00000561036 CYP3A7P24462 503 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 CCDC173Q0VFZ6 552 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L24Q0WX57 530 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 SPP2Q13103 211 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 MTMR2Q13614 643 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USH1GQ495M9 461 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 PRAMEF18Q5VWM3 479 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 USP17L6PQ6QN14 398 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 IQUBQ8NA54 791 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 ZKSCAN4Q969J2 545 aaPredicted RBP19.4■□□□□ 0.7
HDDC3-206ENST00000561036 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 ANO3Q9BYT9 981 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 CCSER1Q9C0I3 900 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 SERTAD1Q9UHV2 236 aa19.4■□□□□ 0.7
HDDC3-206ENST00000561036 SPDYE3A6NKU9 549 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 EDIL3O43854 480 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 ICAM1P05362 532 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 VCAM1P19320 739 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 EPHX2P34913 555 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 ZNF165P49910 485 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 NLRP12P59046 1061 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 MAP3K9P80192 1104 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 POSTNQ15063 836 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 CALCRLQ16602 461 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 CEP57L1Q8IYX8 460 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 MBOAT7Q96N66 472 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 PPP1R9BQ96SB3 815 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 FBXO28Q9NVF7 368 aa19.39■□□□□ 0.69
HDDC3-206ENST00000561036 IQCA1LA6NCM1 817 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms