RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HYOU1Q9Y4L1 999 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 PCDHA13Q9Y5I0 950 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 PP2D1A8MPX8 630 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 E7EVH7 732 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 GLI1P08151 1106 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 DDR1Q08345 913 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 PTGISQ16647 500 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 EPB41L5Q9HCM4 733 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 PPP1R37O75864 691 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 GUCY2DQ02846 1103 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 MAP3K12Q12852 859 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 KDM7AQ6ZMT4 941 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 CEP57Q86XR8 500 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 CAVIN3Q969G5 261 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 SH2D4AQ9H788 454 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 MYH6P13533 1939 aa18.34■□□□□ 0.53
TPM1-228ENST00000560975 PSMA7O14818 248 aa18.33■□□□□ 0.53
TPM1-228ENST00000560975 BUB1O43683 1085 aa18.33■□□□□ 0.53
TPM1-228ENST00000560975 ECM2O94769 699 aaPredicted RBP18.33■□□□□ 0.53
TPM1-228ENST00000560975 MYCBPAPQ8TBZ2 947 aa18.33■□□□□ 0.53
TPM1-228ENST00000560975 N4BP2L2Q92802 583 aaPredicted RBP18.33■□□□□ 0.53
TPM1-228ENST00000560975 THAP9Q9H5L6 903 aa18.33■□□□□ 0.53
TPM1-228ENST00000560975 LRP6O75581 1613 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 A6NNZ2 444 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
TPM1-228ENST00000560975 CSF1RP07333 972 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 RNASE9P60153 205 aaKnown RBP18.33■□□□□ 0.52
TPM1-228ENST00000560975 NEDD9Q14511 834 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 NPY5RQ15761 445 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 TUBB8Q3ZCM7 444 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 SPATS2Q86XZ4 545 aaKnown RBP18.33■□□□□ 0.52
TPM1-228ENST00000560975 SPATA5Q8NB90 893 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 VCPKMTQ9H867 229 aa18.33■□□□□ 0.52
TPM1-228ENST00000560975 NLRP5P59047 1200 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 MAATS1Q7Z4T9 603 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 SDR42E1Q8WUS8 393 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 TNFRSF25Q93038 417 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 CNOT6LQ96LI5 555 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 SLC40A1Q9NP59 571 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 KIF1AQ12756 1690 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 PRPF3O43395 683 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 AKR1B10O60218 316 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 HEXIM1O94992 359 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 PDE8BO95263 885 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 TCP1P17987 556 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 NF2P35240 595 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 EIF4A3P38919 411 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 TRADDQ15628 312 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 CEP85LQ5SZL2 805 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 CCDC114Q96M63 670 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 ATXN2Q99700 1313 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 NUP58Q9BVL2 599 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.525e-8■■■■□ 19.9
TPM1-228ENST00000560975 SALL4Q9UJQ4 1053 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 ATP2C2O75185 946 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 VEGFAP15692 232 aaPredicted RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 ELF1P32519 619 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 FUT2Q10981 343 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 TTI2Q6NXR4 508 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 IQCKQ8N0W5 287 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 ALS2CR12Q96Q35 445 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 FAM207AQ9NSI2 230 aaPredicted RBP18.32■□□□□ 0.52
TPM1-228ENST00000560975 ARHGAP20Q9P2F6 1191 aa18.32■□□□□ 0.52
TPM1-228ENST00000560975 PDHBP11177 359 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 ERCC3P19447 782 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 CDR1P51861 262 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 KIF11P52732 1056 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 IFT20Q8IY31 132 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 ENAHQ8N8S7 591 aaPredicted RBP18.31■□□□□ 0.52
TPM1-228ENST00000560975 DUSP9Q99956 384 aaKnown RBP18.31■□□□□ 0.52
TPM1-228ENST00000560975 BACH1O14867 736 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 KIF1CO43896 1103 aaKnown RBP18.31■□□□□ 0.52
TPM1-228ENST00000560975 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 MDH1P40925 334 aaKnown RBP18.31■□□□□ 0.52
TPM1-228ENST00000560975 SEC23AQ15436 765 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 VGLL2Q8N8G2 317 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 MCM8Q9UJA3 840 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 ODF2LQ9ULJ1 636 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 CHD4Q14839 1912 aa18.31■□□□□ 0.52
TPM1-228ENST00000560975 CLGNO14967 610 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 EPHB6O15197 1021 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 ARID4AP29374 1257 aaPredicted RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 SMTNP53814 917 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 ITIH3Q06033 890 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 KCTD19Q17RG1 926 aaPredicted RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 IFIT1BQ5T764 474 aaKnown RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 TMC4Q7Z404 712 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 CATIPQ7Z7H3 387 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 PIK3R5Q8WYR1 880 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 LMTK3Q96Q04 1460 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms