RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ITPRIPQ8IWB1 547 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 CHST13Q8NET6 341 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 CD320Q9NPF0 282 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 HOMER2Q9NSB8 354 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 COG5Q9UP83 839 aa11.9□□□□□ -0.5
TPM1-225ENST00000560679 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
TPM1-225ENST00000560679 GPR37L1O60883 481 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 ZBED4O75132 1171 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 TAP1Q03518 808 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
TPM1-225ENST00000560679 A1CFQ9NQ94 594 aaKnown RBP11.89□□□□□ -0.51
TPM1-225ENST00000560679 TRMT13Q9NUP7 481 aaKnown RBP11.89□□□□□ -0.51
TPM1-225ENST00000560679 PAG1Q9NWQ8 432 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 FBXO40Q9UH90 709 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 SLC4A4Q9Y6R1 1079 aa11.89□□□□□ -0.51
TPM1-225ENST00000560679 LPXNO60711 386 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 CYP2C9P11712 490 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 OAZ1P54368 228 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 NOL8Q76FK4 1167 aaKnown RBP11.88□□□□□ -0.51
TPM1-225ENST00000560679 FBXO16Q8IX29 292 aaPredicted RBP11.88□□□□□ -0.51
TPM1-225ENST00000560679 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 RPUSD2Q8IZ73 545 aaKnown RBP11.88□□□□□ -0.51
TPM1-225ENST00000560679 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 PUS7LQ9H0K6 701 aaKnown RBP11.88□□□□□ -0.51
TPM1-225ENST00000560679 PDGFCQ9NRA1 345 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
TPM1-225ENST00000560679 SCN10AQ9Y5Y9 1956 aa11.88□□□□□ -0.51
TPM1-225ENST00000560679 ZNF536O15090 1300 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 TET1Q8NFU7 2136 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 DYNC1LI2O43237 492 aaPredicted RBP11.87□□□□□ -0.51
TPM1-225ENST00000560679 PFKMP08237 780 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 GRB10Q13322 594 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 DEFB128Q7Z7B8 93 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 ALYREFQ86V81 257 aaKnown RBP11.87□□□□□ -0.51
TPM1-225ENST00000560679 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
TPM1-225ENST00000560679 STK11IPQ8N1F8 1099 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 LRRC47Q8N1G4 583 aaKnown RBP11.87□□□□□ -0.51
TPM1-225ENST00000560679 HLA-CQ95604 372 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 SLC9A7Q96T83 725 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 AP5M1Q9H0R1 490 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 BOLA2Q9H3K6 86 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 CLIP2Q9UDT6 1046 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
TPM1-225ENST00000560679 TNKSO95271 1327 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 PI4K2BG5E9Z4 385 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 SBK1Q52WX2 424 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
TPM1-225ENST00000560679 CEP95Q96GE4 821 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 EPB41L4AQ9HCS5 686 aaPredicted RBP11.86□□□□□ -0.51
TPM1-225ENST00000560679 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
TPM1-225ENST00000560679 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 LCHNA4D1U4 455 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 ASB14A6NK59 587 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 GSG1L2A8MUP6 293 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 RBAK-RBAKDNI3L0D1 243 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 IFIT2P09913 472 aaKnown RBP11.85□□□□□ -0.51
TPM1-225ENST00000560679 EEPD1Q7L9B9 569 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 GMCL1P1Q8NEA9 526 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 GDPD5Q8WTR4 605 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 PPP1R13LQ8WUF5 828 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 MKL1Q969V6 931 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 PURBQ96QR8 312 aaKnown RBP11.85□□□□□ -0.51
TPM1-225ENST00000560679 HAUS7Q99871 368 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.51
TPM1-225ENST00000560679 COG6Q9Y2V7 657 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 Q9Y3F1 56 aa11.85□□□□□ -0.51
TPM1-225ENST00000560679 CTDP1Q9Y5B0 961 aaPredicted RBP11.85□□□□□ -0.51
TPM1-225ENST00000560679 ZEB2O60315 1214 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 PRDM1O75626 825 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 BMP3P12645 472 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 ATP5JP18859 108 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 PURAQ00577 322 aaKnown RBP11.84□□□□□ -0.51
TPM1-225ENST00000560679 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
TPM1-225ENST00000560679 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 RPAP2Q8IXW5 612 aaPredicted RBP11.84□□□□□ -0.51
TPM1-225ENST00000560679 PHOSPHO2Q8TCD6 241 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 STRBPQ96SI9 672 aaKnown RBP11.84□□□□□ -0.51
TPM1-225ENST00000560679 MKNK2Q9HBH9 465 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 MTMR4Q9NYA4 1195 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 SYNPO2Q9UMS6 1093 aa11.84□□□□□ -0.51
TPM1-225ENST00000560679 TMEM232C9JQI7 657 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 ACTN1P12814 892 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 RFC2P35250 354 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 STAT2P52630 851 aa11.83□□□□□ -0.52
TPM1-225ENST00000560679 DUSP28Q4G0W2 176 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms