RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 TMCO2Q7Z6W1 182 aaPredicted RBP13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 BANK1Q8NDB2 785 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 NEUROD6Q96NK8 337 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 CNTNAP3BQ96NU0 1288 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 CNTNAP3Q9BZ76 1288 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 AP5M1Q9H0R1 490 aa13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 ZNF214Q9UL59 606 aaPredicted RBP13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
KNSTRN-211ENST00000560673 VWA5AO00534 786 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 WDR46O15213 610 aaKnown RBP13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 KDM4AO75164 1064 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 IQCF3P0C7M6 154 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 NBL1P41271 181 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 NUBP1P53384 320 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 ARMCX2Q7L311 632 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 TLK2Q86UE8 772 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 CLDND1Q9NY35 253 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 ASTN1O14525 1302 aa13.84□□□□□ -0.19
KNSTRN-211ENST00000560673 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 GJB5O95377 273 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 MCAMP43121 646 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 DYNLL1P63167 89 aaKnown RBP13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 COL19A1Q14993 1142 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 TCEAL5Q5H9L2 206 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 SH2D4AQ9H788 454 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
KNSTRN-211ENST00000560673 MYH1P12882 1939 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 EP300Q09472 2414 aaPredicted RBP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 FRYLO94915 3013 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 STXBP3O00186 592 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 DYNC1LI2O43237 492 aaPredicted RBP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 NCK2O43639 380 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 NKD2Q969F2 451 aaPredicted RBP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 COPRSQ9NQ92 184 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 FBXO28Q9NVF7 368 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 GNEQ9Y223 722 aaKnown RBP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 SIP14410 1827 aa13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 ANKRD11Q6UB99 2663 aaPredicted RBP13.82□□□□□ -0.2
KNSTRN-211ENST00000560673 MBTPS2O43462 519 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 DEFB103AP81534 67 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 SIGLEC14Q08ET2 396 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 TFCP2Q12800 502 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 CLUL1Q15846 466 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 REPS2Q8NFH8 660 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 C17orf80Q9BSJ5 609 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 KATNBL1Q9H079 304 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 NSUN3Q9H649 340 aaKnown RBP13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 PPP1R9AQ9ULJ8 1098 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 TMX2Q9Y320 296 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
KNSTRN-211ENST00000560673 MCM3APO60318 1980 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 UQCRFS1P1P0C7P4 283 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 PLCD1P51178 756 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 BFSP2Q13515 415 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 PARP14Q460N5 1801 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
KNSTRN-211ENST00000560673 LTBRP36941 435 aa13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 MCTP2Q6DN12 878 aa13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 FGD4Q96M96 766 aa13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 SNRKQ9NRH2 765 aa13.79□□□□□ -0.2
KNSTRN-211ENST00000560673 IGSF3O75054 1194 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 POLR3DP05423 398 aaPredicted RBP13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 UBTFL1P0CB47 393 aaPredicted RBP13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 SMPD1P17405 629 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 ICA1Q05084 483 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 GABPAQ06546 454 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 MIGA1Q8NAN2 632 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 ASIC4Q96FT7 647 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 Q9Y3F1 56 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 INSL6Q9Y581 213 aa13.78□□□□□ -0.2
KNSTRN-211ENST00000560673 PTPRCP08575 1304 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 CYP7A1P22680 504 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 MYO7AQ13402 2215 aa13.77□□□□□ -0.21
KNSTRN-211ENST00000560673 EPC2Q52LR7 807 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms