RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CLCN5P51795 746 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
HERC1-208ENST00000560462 LMNB2Q03252 620 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 RING1Q06587 406 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 KCNA1Q09470 495 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 QPCTQ16769 361 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 RAD9AQ99638 391 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 TRPV6Q9H1D0 765 aa8.12□□□□□ -1.11
HERC1-208ENST00000560462 DSPP15924 2871 aaKnown RBP8.12□□□□□ -1.11
HERC1-208ENST00000560462 TAF4O00268 1085 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 BRD1O95696 1058 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 ZNF865P0CJ78 1059 aaPredicted RBP8.11□□□□□ -1.11
HERC1-208ENST00000560462 RFC2P35250 354 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 IFIT5Q13325 482 aaKnown RBP8.11□□□□□ -1.11
HERC1-208ENST00000560462 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 TMCO2Q7Z6W1 182 aaPredicted RBP8.11□□□□□ -1.11
HERC1-208ENST00000560462 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
HERC1-208ENST00000560462 SLC43A3Q8NBI5 491 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 SHCBP1Q8NEM2 672 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 RPGRIP1Q96KN7 1286 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
HERC1-208ENST00000560462 C17orf80Q9BSJ5 609 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 PLA2G12BQ9BX93 195 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERC1-208ENST00000560462 MFSD1Q9H3U5 465 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
HERC1-208ENST00000560462 SPC25Q9HBM1 224 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 SCUBE2Q9NQ36 999 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 CNPY2Q9Y2B0 182 aa8.11□□□□□ -1.11
HERC1-208ENST00000560462 ITPR1Q14643 2758 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 SMG1Q96Q15 3661 aaKnown RBP8.1□□□□□ -1.11
HERC1-208ENST00000560462 SMCHD1A6NHR9 2005 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 LOC400499M0QZD8 3231 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L15C9J2P7 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L13C9JLJ4 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L11C9JVI0 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L18D6R9N7 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L22D6RA61 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L17D6RBQ6 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L19D6RCP7 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L20D6RJB6 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 B4GALT4O60513 344 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 DUSP11O75319 330 aaKnown RBP8.1□□□□□ -1.11
HERC1-208ENST00000560462 TBX10O75333 385 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 IGKV5-2P06315 115 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 HOXB7P09629 217 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP46P62068 366 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 SHC2P98077 582 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 USP17L24Q0WX57 530 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 PICALMQ13492 652 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 CAVIN4Q5BKX8 364 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 ZC3H14Q6PJT7 736 aaKnown RBP8.1□□□□□ -1.11
HERC1-208ENST00000560462 LBX2Q6XYB7 198 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 LDHAL6AQ6ZMR3 332 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 CCDC105Q8IYK2 499 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 ABRAQ8N0Z2 381 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 TINF2Q9BSI4 451 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 MOV10L1Q9BXT6 1211 aaKnown RBP8.1□□□□□ -1.11
HERC1-208ENST00000560462 ANKFY1Q9P2R3 1169 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 FAM184BQ9ULE4 1060 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 SIP14410 1827 aa8.1□□□□□ -1.11
HERC1-208ENST00000560462 DLG5Q8TDM6 1919 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 CLSPNQ9HAW4 1339 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 H7C1W4 665 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 GJB5O95377 273 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 EYA4O95677 639 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 ASNSP08243 561 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 ERCC3P19447 782 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
HERC1-208ENST00000560462 HYAL1Q12794 435 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 ITGA7Q13683 1181 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
HERC1-208ENST00000560462 UBALD2Q8IYN6 164 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 PHF7Q9BWX1 381 aaPredicted RBP8.09□□□□□ -1.11
HERC1-208ENST00000560462 TMEM134Q9H6X4 195 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 DDX4Q9NQI0 724 aaKnown RBP8.09□□□□□ -1.11
HERC1-208ENST00000560462 CNNM1Q9NRU3 951 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.11
HERC1-208ENST00000560462 DDX58O95786 925 aaKnown RBP8.08□□□□□ -1.12
HERC1-208ENST00000560462 NDUFV2P19404 249 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 PMLP29590 882 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 ZNF200P98182 395 aaPredicted RBP8.08□□□□□ -1.12
HERC1-208ENST00000560462 GPM6BQ13491 265 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 MTMR3Q13615 1198 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 GCKRQ14397 625 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 USP17L2Q6R6M4 530 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 ZGPATQ8N5A5 531 aaKnown RBP8.08□□□□□ -1.12
HERC1-208ENST00000560462 DTWD2Q8NBA8 298 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 SEZ6LQ9BYH1 1024 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 ZSWIM6Q9HCJ5 1215 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 NCDNQ9UBB6 729 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 MTMR7Q9Y216 660 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 MAP3K2Q9Y2U5 619 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 COL4A3Q01955 1670 aa8.08□□□□□ -1.12
HERC1-208ENST00000560462 CDK5RAP2Q96SN8 1893 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 H3BNC9 293 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 CABYRO75952 493 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms