RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 MCTP2Q6DN12 878 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 ISM2Q6H9L7 571 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 HEATR3Q7Z4Q2 680 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 NEK8Q86SG6 692 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 TMC2Q8TDI7 906 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 NOC3LQ8WTT2 800 aaKnown RBP10.97□□□□□ -0.65
RTF1-206ENST00000560447 KHSRPQ92945 711 aaKnown RBP eCLIP10.97□□□□□ -0.65
RTF1-206ENST00000560447 TEKT1Q969V4 418 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 CEP95Q96GE4 821 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 C16orf45Q96MC5 204 aaPredicted RBP10.97□□□□□ -0.65
RTF1-206ENST00000560447 DHX36Q9H2U1 1008 aaKnown RBP10.97□□□□□ -0.65
RTF1-206ENST00000560447 DISC1Q9NRI5 854 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 MTMR4Q9NYA4 1195 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 LRRC10BA6NIK2 292 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 WNT7AO00755 349 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 TTLL1O95922 423 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 OR52Z1P0C646 297 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 PDHBP11177 359 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 UBA7P41226 1012 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 STAT6P42226 847 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 FMR1Q06787 632 aaKnown RBP eCLIP10.96□□□□□ -0.65
RTF1-206ENST00000560447 STIM1Q13586 685 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 ARID5BQ14865 1188 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 SLC35G1Q2M3R5 365 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 COBLL1Q53SF7 1204 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 E4F1Q66K89 784 aaPredicted RBP10.96□□□□□ -0.65
RTF1-206ENST00000560447 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 DPF2Q92785 391 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.65
RTF1-206ENST00000560447 ZDHHC15Q96MV8 337 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 GPR101Q96P66 508 aaPredicted RBP10.96□□□□□ -0.65
RTF1-206ENST00000560447 PANX2Q96RD6 677 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 LIMA1Q9UHB6 759 aaKnown RBP10.96□□□□□ -0.65
RTF1-206ENST00000560447 SYNPO2Q9UMS6 1093 aa10.96□□□□□ -0.65
RTF1-206ENST00000560447 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 PHLPP2Q6ZVD8 1323 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 SMCO2A6NFE2 343 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 H7C1D1 291 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 AFMP43652 599 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 AMPD3Q01432 767 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 IL17AQ16552 155 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 NOM1Q5C9Z4 860 aaKnown RBP10.95□□□□□ -0.66
RTF1-206ENST00000560447 STRIP1Q5VSL9 837 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 RRAGBQ5VZM2 374 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 COL23A1Q86Y22 540 aaPredicted RBP10.95□□□□□ -0.66
RTF1-206ENST00000560447 GRAMD1CQ8IYS0 662 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 REXO1Q8N1G1 1221 aaKnown RBP10.95□□□□□ -0.66
RTF1-206ENST00000560447 ANKRD7Q92527 254 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 PPP1R13BQ96KQ4 1090 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 RAB34Q9BZG1 259 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 LRRC27Q9C0I9 530 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 INTS13Q9NVM9 706 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 KBTBD4Q9NVX7 518 aa10.95□□□□□ -0.66
RTF1-206ENST00000560447 TTF2Q9UNY4 1162 aaKnown RBP10.95□□□□□ -0.66
RTF1-206ENST00000560447 RHOBTB3O94955 611 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 RPN1P04843 607 aaKnown RBP10.94□□□□□ -0.66
RTF1-206ENST00000560447 TPM1P09493 284 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 GCFC2P16383 781 aaKnown RBP10.94□□□□□ -0.66
RTF1-206ENST00000560447 FECHP22830 423 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 PBX1P40424 430 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 ADCY7P51828 1080 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 PAK1Q13153 545 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 INF2Q27J81 1249 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 APTXQ7Z2E3 356 aaKnown RBP10.94□□□□□ -0.66
RTF1-206ENST00000560447 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 SUPT20HQ8NEM7 779 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 MKL1Q969V6 931 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 MTMR8Q96EF0 704 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
RTF1-206ENST00000560447 L2HGDHQ9H9P8 463 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 USP40Q9NVE5 1235 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
RTF1-206ENST00000560447 ADD3Q9UEY8 706 aaKnown RBP10.94□□□□□ -0.66
RTF1-206ENST00000560447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.94□□□□□ -0.663e-7■■□□□ 11.6
RTF1-206ENST00000560447 PNMA6FA0A0J9YX94 578 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 AKR1B15C9JRZ8 316 aaPredicted RBP10.93□□□□□ -0.66
RTF1-206ENST00000560447 VEGFAP15692 232 aaPredicted RBP10.93□□□□□ -0.66
RTF1-206ENST00000560447 EEF1GP26641 437 aaKnown RBP10.93□□□□□ -0.66
RTF1-206ENST00000560447 ETF1P62495 437 aaKnown RBP10.93□□□□□ -0.66
RTF1-206ENST00000560447 ZNF543Q08ER8 600 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 PDIA5Q14554 519 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 ZNF827Q17R98 1081 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 TMEM266Q2M3C6 531 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 CDC42EP5Q6NZY7 148 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 CNNM4Q6P4Q7 775 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 CABP7Q86V35 215 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 PPFIBP1Q86W92 1011 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 TMEM139Q8IV31 216 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 CNGA4Q8IV77 575 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 PDCL2Q8N4E4 241 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 IGSF22Q8N9C0 903 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 DCAF4Q8WV16 495 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms