RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TTLL4Q14679 1199 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 KRT40Q6A162 431 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 PANK1Q8TE04 598 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 AGBL1Q96MI9 1066 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 AP5M1Q9H0R1 490 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 PDGFCQ9NRA1 345 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 TRANK1O15050 2925 aa19.86■□□□□ 0.77
HERC1-207ENST00000560316 EPOPA6NHQ4 379 aa19.85■□□□□ 0.77
HERC1-207ENST00000560316 MINDY4BA8MYZ0 360 aa19.85■□□□□ 0.77
HERC1-207ENST00000560316 CA3P07451 260 aa19.85■□□□□ 0.77
HERC1-207ENST00000560316 SBK1Q52WX2 424 aa19.85■□□□□ 0.77
HERC1-207ENST00000560316 TMEM63BQ5T3F8 832 aa19.85■□□□□ 0.77
HERC1-207ENST00000560316 LRRC47Q8N1G4 583 aaKnown RBP19.85■□□□□ 0.77
HERC1-207ENST00000560316 ACAD9Q9H845 621 aa19.85■□□□□ 0.77
HERC1-207ENST00000560316 A1CFQ9NQ94 594 aaKnown RBP19.85■□□□□ 0.77
HERC1-207ENST00000560316 GSG1L2A8MUP6 293 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 GTPBP6O43824 516 aaPredicted RBP19.84■□□□□ 0.77
HERC1-207ENST00000560316 ZEB2O60315 1214 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 TMEM67Q5HYA8 995 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 EEPD1Q7L9B9 569 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 DEFB128Q7Z7B8 93 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 CEP95Q96GE4 821 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
HERC1-207ENST00000560316 HCN4Q9Y3Q4 1203 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 MYH4Q9Y623 1939 aa19.84■□□□□ 0.77
HERC1-207ENST00000560316 MYH7P12883 1935 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 ASB14A6NK59 587 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 PRDM1O75626 825 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 CYP2C9P11712 490 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 FBXO16Q8IX29 292 aaPredicted RBP19.83■□□□□ 0.77
HERC1-207ENST00000560316 SIRT2Q8IXJ6 389 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 MKL1Q969V6 931 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 CHMP4CQ96CF2 233 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 SEZ6LQ9BYH1 1024 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 ALDH8A1Q9H2A2 487 aaPredicted RBP19.83■□□□□ 0.77
HERC1-207ENST00000560316 RNF146Q9NTX7 359 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 TRMT13Q9NUP7 481 aaKnown RBP19.83■□□□□ 0.77
HERC1-207ENST00000560316 ISY1Q9ULR0 285 aaKnown RBP19.83■□□□□ 0.77
HERC1-207ENST00000560316 COG6Q9Y2V7 657 aa19.83■□□□□ 0.77
HERC1-207ENST00000560316 TMEM232C9JQI7 657 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 BMP3P12645 472 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 POU3F3P20264 500 aaPredicted RBP19.82■□□□□ 0.76
HERC1-207ENST00000560316 SLFN13Q68D06 897 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 ZSCAN25Q6NSZ9 544 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 TAPT1Q6NXT6 567 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 GMCL1P1Q8NEA9 526 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 MTMR4Q9NYA4 1195 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 LRRC37A2A6NM11 1700 aa19.82■□□□□ 0.76
HERC1-207ENST00000560316 ZNF536O15090 1300 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 TLL1O43897 1013 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 RAB11FIP3O75154 756 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 ARHGEF15O94989 841 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 TMEM31Q5JXX7 168 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 IQSEC1Q6DN90 963 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 ZNF444Q8N0Y2 327 aaPredicted RBP19.81■□□□□ 0.76
HERC1-207ENST00000560316 ARNTL2Q8WYA1 636 aa19.81■□□□□ 0.76
HERC1-207ENST00000560316 ARIH1Q9Y4X5 557 aaPredicted RBP19.81■□□□□ 0.76
HERC1-207ENST00000560316 CCER2I3L3R5 266 aa19.8■□□□□ 0.76
HERC1-207ENST00000560316 TTLL1O95922 423 aa19.8■□□□□ 0.76
HERC1-207ENST00000560316 ALAS1P13196 640 aa19.8■□□□□ 0.76
HERC1-207ENST00000560316 KHSRPQ92945 711 aaKnown RBP eCLIP19.8■□□□□ 0.762e-7■□□□□ 10.2
HERC1-207ENST00000560316 TRERF1Q96PN7 1200 aa19.8■□□□□ 0.76
HERC1-207ENST00000560316 PURBQ96QR8 312 aaKnown RBP19.8■□□□□ 0.76
HERC1-207ENST00000560316 COG5Q9UP83 839 aa19.8■□□□□ 0.76
HERC1-207ENST00000560316 Q9Y3F1 56 aa19.8■□□□□ 0.76
HERC1-207ENST00000560316 TNKSO95271 1327 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 HMMRO75330 724 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 PFKMP08237 780 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 FDX1P10109 184 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 STAT2P52630 851 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 SNAP25P60880 206 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 TAP1Q03518 808 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 IKQ13123 557 aaPredicted RBP19.79■□□□□ 0.76
HERC1-207ENST00000560316 MUM1L1Q5H9M0 696 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 GIMAP6Q6P9H5 292 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 KIAA1211Q6ZU35 1233 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 RPAP2Q8IXW5 612 aaPredicted RBP19.79■□□□□ 0.76
HERC1-207ENST00000560316 EPB41L4AQ9HCS5 686 aaPredicted RBP19.79■□□□□ 0.76
HERC1-207ENST00000560316 SCN5AQ14524 2016 aa19.79■□□□□ 0.76
HERC1-207ENST00000560316 FAM86C2PA6NEL3 165 aa19.78■□□□□ 0.76
HERC1-207ENST00000560316 PPP1R13LQ8WUF5 828 aa19.78■□□□□ 0.76
HERC1-207ENST00000560316 HLA-CQ95604 372 aa19.78■□□□□ 0.76
HERC1-207ENST00000560316 OSBP2Q969R2 916 aa19.78■□□□□ 0.76
HERC1-207ENST00000560316 C11orf16Q9NQ32 467 aa19.78■□□□□ 0.76
HERC1-207ENST00000560316 SYNPO2Q9UMS6 1093 aa19.78■□□□□ 0.76
HERC1-207ENST00000560316 SUPT20HL2P0C7V6 817 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 ACTN1P12814 892 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 TDO2P48775 406 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 TKFCQ3LXA3 575 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 SPRED2Q7Z698 418 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 FAM160B2Q86V87 743 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 CHURC1Q8WUH1 139 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 STAG1Q8WVM7 1258 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 SLC9A7Q96T83 725 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 VTA1Q9NP79 307 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 CYP39A1Q9NYL5 469 aa19.77■□□□□ 0.76
HERC1-207ENST00000560316 MYL3P08590 195 aa19.76■□□□□ 0.75
HERC1-207ENST00000560316 MCCP23508 829 aa19.76■□□□□ 0.75
HERC1-207ENST00000560316 PURAQ00577 322 aaKnown RBP19.76■□□□□ 0.75
HERC1-207ENST00000560316 GRB10Q13322 594 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms