RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 CD4P01730 458 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 CSF2RAP15509 400 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 CNTN2Q02246 1040 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 GRIN2CQ14957 1233 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 RAB30Q15771 203 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
LINC02253-202ENST00000560314 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 TRERF1Q96PN7 1200 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 GAS2L1Q99501 681 aaPredicted RBP13.22□□□□□ -0.29
LINC02253-202ENST00000560314 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC02253-202ENST00000560314 GBF1Q92538 1859 aa13.22□□□□□ -0.29
LINC02253-202ENST00000560314 LOC102724159A0A0B4J2E5 919 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 MX1P20591 662 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 MCCP23508 829 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 PWP2Q15269 919 aaKnown RBP13.21□□□□□ -0.29
LINC02253-202ENST00000560314 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 NOL8Q76FK4 1167 aaKnown RBP13.21□□□□□ -0.29
LINC02253-202ENST00000560314 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
LINC02253-202ENST00000560314 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 VTA1Q9NP79 307 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 IL23AQ9NPF7 189 aa13.21□□□□□ -0.29
LINC02253-202ENST00000560314 ASTN1O14525 1302 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
LINC02253-202ENST00000560314 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 ALAS1P13196 640 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 NOVP48745 357 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
LINC02253-202ENST00000560314 ITGA7Q13683 1181 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 RCSD1Q6JBY9 416 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 CXCL17Q6UXB2 119 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 ZNF365Q70YC5 407 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 HIPK3Q9H422 1215 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 CYP39A1Q9NYL5 469 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
LINC02253-202ENST00000560314 ORC4O43929 436 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 ICAM1P05362 532 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 SMPD1P17405 629 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 BEX3Q00994 111 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 ADD3Q9UEY8 706 aaKnown RBP13.19□□□□□ -0.3
LINC02253-202ENST00000560314 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 SCN10AQ9Y5Y9 1956 aa13.19□□□□□ -0.3
LINC02253-202ENST00000560314 FOXP2O15409 715 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 PFKMP08237 780 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 ACRP10323 421 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 FBXO16Q8IX29 292 aaPredicted RBP13.18□□□□□ -0.3
LINC02253-202ENST00000560314 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
LINC02253-202ENST00000560314 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 MUC3AQ02505 3323 aa13.18□□□□□ -0.3
LINC02253-202ENST00000560314 ZMYM6O95789 1325 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 TANC1Q9C0D5 1861 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 DYNC1LI2O43237 492 aaPredicted RBP13.17□□□□□ -0.3
LINC02253-202ENST00000560314 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
LINC02253-202ENST00000560314 FGBP02675 491 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 FGRP09769 529 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 CYP2C18P33260 490 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 PBX2P40425 430 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 ALX1Q15699 326 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 DUSP28Q4G0W2 176 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 TAPT1Q6NXT6 567 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 RPUSD2Q8IZ73 545 aaKnown RBP13.17□□□□□ -0.3
LINC02253-202ENST00000560314 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
LINC02253-202ENST00000560314 PRDM6Q9NQX0 595 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
LINC02253-202ENST00000560314 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
LINC02253-202ENST00000560314 SPTBN5Q9NRC6 3674 aaKnown RBP13.17□□□□□ -0.3
LINC02253-202ENST00000560314 RAD50Q92878 1312 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 B4GALT4O60513 344 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 NMT2O60551 498 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 SUPT20HL2P0C7V6 817 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
LINC02253-202ENST00000560314 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
LINC02253-202ENST00000560314 CPT1AP50416 773 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 ALDH5A1P51649 535 aaPredicted RBP13.16□□□□□ -0.3
LINC02253-202ENST00000560314 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
LINC02253-202ENST00000560314 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
LINC02253-202ENST00000560314 ATXN2LQ8WWM7 1075 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms