RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
TPM1-221ENST00000559831 BLIDQ8IZY5 108 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 SMCR8Q8TEV9 937 aaPredicted RBP11.98□□□□□ -0.49
TPM1-221ENST00000559831 CUL5Q93034 780 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 CAPNS2Q96L46 248 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 PTPN18Q99952 460 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 PCDHA4Q9UN74 947 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
TPM1-221ENST00000559831 MRPL11Q9Y3B7 192 aaKnown RBP11.98□□□□□ -0.49
TPM1-221ENST00000559831 ESYT2A0FGR8 921 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 IGF2BP3O00425 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM1-221ENST00000559831 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 AOC2O75106 756 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 STAT3P40763 770 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 OAZ1P54368 228 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 HTRA3P83110 453 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 NR5A1Q13285 461 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 UBE2SQ16763 222 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 LBX2Q6XYB7 198 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 FAM177A1Q8N128 213 aaPredicted RBP11.97□□□□□ -0.49
TPM1-221ENST00000559831 MB21D1Q8N884 522 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 RASGRP4Q8TDF6 673 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
TPM1-221ENST00000559831 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 PARK7Q99497 189 aaKnown RBP11.97□□□□□ -0.49
TPM1-221ENST00000559831 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 RIC8AQ9NPQ8 531 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 BTBD7Q9P203 1132 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 BIN2Q9UBW5 565 aaPredicted RBP11.97□□□□□ -0.49
TPM1-221ENST00000559831 PNMA2Q9UL42 364 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 MYH7BA7E2Y1 1941 aa11.97□□□□□ -0.49
TPM1-221ENST00000559831 ZNFX1Q9P2E3 1918 aaKnown RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 CNMDO75829 334 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 MRPL12P52815 198 aaKnown RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 INHBEP58166 350 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 NPY5RQ15761 445 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 JAKMIP3Q5VZ66 844 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 FAM173BQ6P4H8 233 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 TRERF1Q96PN7 1200 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 TEX13BQ9BXU2 312 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 SPATC1LQ9H0A9 340 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 RNF146Q9NTX7 359 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
TPM1-221ENST00000559831 ZNF214Q9UL59 606 aaPredicted RBP11.96□□□□□ -0.49
TPM1-221ENST00000559831 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 NFIBO00712 420 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 ATP2A1O14983 1001 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 CFBP00751 764 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 NOGQ13253 232 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 TKFCQ3LXA3 575 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
TPM1-221ENST00000559831 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 USP17L6PQ6QN14 398 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 PIK3AP1Q6ZUJ8 805 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 BRAPQ7Z569 592 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 NCAPG2Q86XI2 1143 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 NOSTRINQ8IVI9 506 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
TPM1-221ENST00000559831 ANKRD13CQ8N6S4 541 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 CHAMP1Q96JM3 812 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 PGBD1Q96JS3 809 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 GLT8D2Q9H1C3 349 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 RBPJLQ9UBG7 517 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 PCDHA6Q9UN73 950 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 RABGAP1Q9Y3P9 1069 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 RIPK3Q9Y572 518 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 PCDHA8Q9Y5H6 950 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 ATP6V1DQ9Y5K8 247 aa11.95□□□□□ -0.5
TPM1-221ENST00000559831 GCOM1H8Y6P7 765 aaPredicted RBP11.94□□□□□ -0.5
TPM1-221ENST00000559831 OPLAHO14841 1288 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
TPM1-221ENST00000559831 ATP2B1P20020 1258 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.54e-8■■■■■ 38.8
TPM1-221ENST00000559831 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
TPM1-221ENST00000559831 GCLCP48506 637 aaPredicted RBP11.94□□□□□ -0.5
TPM1-221ENST00000559831 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 ERVK-24P63145 666 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 KRT25Q7Z3Z0 450 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 RIOX2Q8IUF8 465 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 TBC1D5Q92609 795 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 TNFRSF25Q93038 417 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms