RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 STK4Q13043 487 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 CC2D1AQ6P1N0 951 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 C15orf52Q6ZUT6 534 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 KRT25Q7Z3Z0 450 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 COA7Q96BR5 231 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 ZBTB9Q96C00 473 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 C6orf50Q9HD87 102 aa11.28□□□□□ -0.6
LRRC28-216ENST00000559819 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
LRRC28-216ENST00000559819 MYH8P13535 1937 aa11.27□□□□□ -0.6
LRRC28-216ENST00000559819 LGALS16A8MUM7 142 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 TBC1D8O95759 1140 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 SERPINB2P05120 415 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 PRPHP41219 470 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 ASIC1P78348 528 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 MMTAG2Q9BU76 263 aaKnown RBP11.27□□□□□ -0.61
LRRC28-216ENST00000559819 TRIM9Q9C026 710 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
LRRC28-216ENST00000559819 TAF1LQ8IZX4 1826 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 PSMA7O14818 248 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 GYS1P13807 737 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 CHMP4BP1P59074 171 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 STIM1Q13586 685 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 TRIM14Q14142 442 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 ANKRD40Q6AI12 368 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 SRGAP1Q7Z6B7 1085 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 CERKQ8TCT0 537 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 RABGGTAQ92696 567 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 CDC23Q9UJX2 597 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 CDK5RAP2Q96SN8 1893 aa11.27□□□□□ -0.61
LRRC28-216ENST00000559819 CTAGE9A4FU28 777 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 LAD1O00515 517 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 TXKP42681 527 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 CSGALNACT2Q8N6G5 542 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 MXD3Q9BW11 206 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 THAP9Q9H5L6 903 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 EXOC1Q9NV70 894 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 MAGEC2Q9UBF1 373 aaPredicted RBP11.26□□□□□ -0.61
LRRC28-216ENST00000559819 RASSF10A6NK89 507 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 NDUFA10O95299 355 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 TDP2O95551 362 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 AKR1B1P15121 316 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 EEF1GP26641 437 aaKnown RBP11.26□□□□□ -0.61
LRRC28-216ENST00000559819 NT5C2P49902 561 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 GTF2IP78347 998 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 CRY2Q49AN0 593 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 WDR59Q6PJI9 974 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 P2RX5Q93086 422 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 RBM17Q96I25 401 aaKnown RBP11.26□□□□□ -0.61
LRRC28-216ENST00000559819 GUCA1BQ9UMX6 200 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 DAGLAQ9Y4D2 1042 aa11.26□□□□□ -0.61
LRRC28-216ENST00000559819 EPN1Q9Y6I3 576 aaPredicted RBP11.26□□□□□ -0.61
LRRC28-216ENST00000559819 UBAP1LF5GYI3 381 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 POLR3GO15318 223 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 SLC37A4O43826 429 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 EDIL3O43854 480 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 PDHBP11177 359 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 GNA11P29992 359 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 ST5P78524 1137 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 REXO1Q8N1G1 1221 aaKnown RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 CNOT6LQ96LI5 555 aaKnown RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 NAPGQ99747 312 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 ANKZF1Q9H8Y5 726 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 AGPAT5Q9NUQ2 364 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 LUC7L2Q9Y383 392 aaKnown RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 THSD7AQ9UPZ6 1657 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 HERVK_113P62684 666 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 KIAA0895Q8NCT3 520 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 GJA10Q969M2 543 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 AK8Q96MA6 479 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 PNKPQ96T60 521 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 C7orf25Q9BPX7 421 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 SLC39A2Q9NP94 309 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 DDX4Q9NQI0 724 aaKnown RBP11.25□□□□□ -0.61
LRRC28-216ENST00000559819 GAKO14976 1311 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 LY75O60449 1722 aa11.25□□□□□ -0.61
LRRC28-216ENST00000559819 A0A1W2PQC6 194 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 MYL1P05976 194 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 CCNE1P24864 410 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 DDR1Q08345 913 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 GRB10Q13322 594 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 MCM6Q14566 821 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 DHTKD1Q96HY7 919 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-216ENST00000559819 PNMA5Q96PV4 448 aa11.24□□□□□ -0.61
LRRC28-216ENST00000559819 UIMC1Q96RL1 719 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms