RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PUF60Q9UHX1 559 aaKnown RBP11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 CUL4AQ13619 759 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 TBC1D7Q9P0N9 293 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 RGPD1P0DJD0 1748 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 IL1R1P14778 569 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 UBASH3AP57075 661 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 PRPF38AQ8NAV1 312 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 IL25Q9H293 177 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 MTMR4Q9NYA4 1195 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 TRAF5O00463 557 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 SSR1P43307 286 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 LRMPQ12912 555 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 CLIC6Q96NY7 704 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 FOXP1Q9H334 677 aaPredicted RBP11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 ZNF75DP51815 510 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 MTMR2Q13614 643 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 VPS36Q86VN1 386 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 ZDHHC15Q96MV8 337 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
CARMIL3-202ENST00000559694 ZBTB5O15062 677 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 CAPN2P17655 700 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 EPHX2P34913 555 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 HUNKP57058 714 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SPAG1Q07617 926 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 LRP10Q7Z4F1 713 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 RSPH14Q9UHP6 348 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 PYCARDQ9ULZ3 195 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 MYCT1Q8N699 235 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 IPO4Q8TEX9 1081 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 LTN1O94822 1766 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 MMP1P03956 469 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 DNM2P50570 870 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SPA17Q15506 151 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 LRCH2Q5VUJ6 765 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 METTL13Q8N6R0 699 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 NT5C3AQ9H0P0 336 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L15C9J2P7 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L13C9JLJ4 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L11C9JVI0 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L18D6R9N7 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L22D6RA61 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L17D6RBQ6 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L19D6RCP7 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L20D6RJB6 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 RASA1P20936 1047 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L24Q0WX57 530 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 USP17L6PQ6QN14 398 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 SLFN12Q8IYM2 578 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 MTA3Q9BTC8 594 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
CARMIL3-202ENST00000559694 CELF2O95319 508 aaKnown RBP11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 CDC27P30260 824 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 BLZF1Q9H2G9 400 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 FEM1BQ9UK73 627 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 BICDL2A1A5D9 508 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 ZNF577Q9BSK1 485 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 RPAP3Q9H6T3 665 aaPredicted RBP11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 STK24Q9Y6E0 443 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 TAF6LQ9Y6J9 622 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 TUBB4AP04350 444 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 RPL13P26373 211 aaKnown RBP11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 CA8P35219 290 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 QRICH1Q2TAL8 776 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 COL14A1Q05707 1796 aaKnown RBP11.86□□□□□ -0.51
CARMIL3-202ENST00000559694 hCG_1984214I3L0E3 225 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms