RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 DDX41Q9UJV9 622 aaKnown RBP6.87□□□□□ -1.31
ZEB1-215ENST00000559476 SMC3Q9UQE7 1217 aa6.87□□□□□ -1.31
ZEB1-215ENST00000559476 ACTL7BQ9Y614 415 aa6.87□□□□□ -1.31
ZEB1-215ENST00000559476 ABCC4O15439 1325 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 PTPRCP08575 1304 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 AOX1Q06278 1338 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 IGHA2P01877 340 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 TNNT1P13805 278 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 YBX3P16989 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 GSDMDP57764 484 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 EIF4A2Q14240 407 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 ZRSR1Q15695 479 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 MAP3K11Q16584 847 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 DYMQ7RTS9 669 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 USP48Q86UV5 1035 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 RTF1Q92541 710 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 TSR2Q969E8 191 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 PLEKHF1Q96S99 279 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 NOL10Q9BSC4 688 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 SRRTQ9BXP5 876 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 NAT10Q9H0A0 1025 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 ACSS3Q9H6R3 686 aa6.86□□□□□ -1.31
ZEB1-215ENST00000559476 DDX19AQ9NUU7 478 aaKnown RBP6.86□□□□□ -1.31
ZEB1-215ENST00000559476 RGS12O14924 1447 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 SIPA1L3O60292 1781 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-215ENST00000559476 SCN11AQ9UI33 1791 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 PKD1L3Q7Z443 1732 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 ELP1O95163 1332 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 PLCH1Q4KWH8 1693 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 CTAGE5O15320 804 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 NFICP08651 508 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 ZSCAN22P10073 491 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-215ENST00000559476 PRKAR2BP31323 418 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 ADMP35318 185 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 GRM2Q14416 872 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 TERF2Q15554 542 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 PTPN14Q15678 1187 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 AKAP4Q5JQC9 854 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-215ENST00000559476 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 TRIM56Q9BRZ2 755 aaKnown RBP6.85□□□□□ -1.31
ZEB1-215ENST00000559476 SCAND2PQ9GZW5 306 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-215ENST00000559476 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 HDAC5Q9UQL6 1122 aa6.85□□□□□ -1.31
ZEB1-215ENST00000559476 COL14A1Q05707 1796 aaKnown RBP6.85□□□□□ -1.31
ZEB1-215ENST00000559476 SLU7O95391 586 aaKnown RBP6.84□□□□□ -1.31
ZEB1-215ENST00000559476 HMOX1P09601 288 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 SLFN14P0C7P3 912 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 RAB6AP20340 208 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 U2AF2P26368 475 aaKnown RBP eCLIP6.84□□□□□ -1.317e-7■■■■■ 29.9
ZEB1-215ENST00000559476 HOXC9P31274 260 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 CCT4P50991 539 aaKnown RBP6.84□□□□□ -1.31
ZEB1-215ENST00000559476 KRT85P78386 507 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 PLCB3Q01970 1234 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 ANKRD1Q15327 319 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 NFE2L2Q16236 605 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 ATP2B3Q16720 1220 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 BRINP3Q76B58 766 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 TMC7Q7Z402 723 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 ABI1Q8IZP0 508 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 AGBL5Q8NDL9 886 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 GATA6Q92908 595 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 TRIM5Q9C035 493 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 NUP62CLQ9H1M0 184 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 ACBD3Q9H3P7 528 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 SEMA6CQ9H3T2 930 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 YY1AP1Q9H869 796 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 TTC12Q9H892 705 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-215ENST00000559476 CTNNA3Q9UI47 895 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 KDM3BQ7LBC6 1761 aa6.84□□□□□ -1.31
ZEB1-215ENST00000559476 KDRP35968 1356 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 COL16A1Q07092 1604 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-215ENST00000559476 SPATA31A3Q5VYP0 1347 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 IGSF1Q8N6C5 1336 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 ZBTB7CA1YPR0 619 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 STX6O43752 255 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 AOC2O75106 756 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 GCP02774 474 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 IVLP07476 585 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 CTSBP07858 339 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 GNAI3P08754 354 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-215ENST00000559476 SDSP20132 328 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 MAPK1P28482 360 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 ASPAP45381 313 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 TWISTNBQ3B726 338 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-215ENST00000559476 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 SULT6B1Q6IMI4 303 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 TMCO3Q6UWJ1 677 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 ZSCAN29Q8IWY8 852 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-215ENST00000559476 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
ZEB1-215ENST00000559476 IP6K1Q92551 441 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 TMEM39AQ9NV64 488 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 TMEM51Q9NW97 253 aa6.83□□□□□ -1.32
ZEB1-215ENST00000559476 LIMCH1Q9UPQ0 1083 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms