RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
SNX1-207ENST00000559401 RNF180Q86T96 592 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 CCDC144CPQ8IYA2 1237 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 ADGRF4Q8IZF3 695 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 FAM133AQ8N9E0 248 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 ANKS1AQ92625 1134 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
SNX1-207ENST00000559401 FAM184BQ9ULE4 1060 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 ZMYND8Q9ULU4 1186 aaPredicted RBP9.56□□□□□ -0.88
SNX1-207ENST00000559401 CEP290O15078 2479 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 WDR19Q8NEZ3 1342 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 KLRF2D3W0D1 207 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 SLC27A2O14975 620 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 PRC1O43663 620 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 SNAI1O95863 264 aaPredicted RBP9.55□□□□□ -0.88
SNX1-207ENST00000559401 COL6A1P12109 1028 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 SYN1P17600 705 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 CALML3P27482 149 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 ACVR2BQ13705 512 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 LRRC41Q15345 812 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 LRRC26Q2I0M4 334 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 MAMDC4Q6UXC1 1216 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 CHRDL2Q6WN34 429 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 SLC30A10Q6XR72 485 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 NFXL1Q6ZNB6 911 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 RNF207Q6ZRF8 634 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 EEPD1Q7L9B9 569 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 CATIPQ7Z7H3 387 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 HOMER1Q86YM7 354 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 NUP133Q8WUM0 1156 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 FGD4Q96M96 766 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 ABHD16BQ9H3Z7 469 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 ADD3Q9UEY8 706 aaKnown RBP9.55□□□□□ -0.88
SNX1-207ENST00000559401 ABCB11O95342 1321 aa9.55□□□□□ -0.88
SNX1-207ENST00000559401 C6orf222P0C671 652 aaPredicted RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 MCM5P33992 734 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 ANTXR2P58335 489 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 QRICH1Q2TAL8 776 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 CCDC144BQ3MJ40 725 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 CREB3L3Q68CJ9 461 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 FBXO16Q8IX29 292 aaPredicted RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 MB21D2Q8IYB1 491 aaPredicted RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 CTCFLQ8NI51 663 aaPredicted RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 PURBQ96QR8 312 aaKnown RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 MPHOSPH6Q99547 160 aaKnown RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 SPC25Q9HBM1 224 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 COLQQ9Y215 455 aaPredicted RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 ATP11BQ9Y2G3 1177 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 DDX49Q9Y6V7 483 aaKnown RBP9.54□□□□□ -0.88
SNX1-207ENST00000559401 BRCA2P51587 3418 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 SYNRGQ9UMZ2 1314 aa9.54□□□□□ -0.88
SNX1-207ENST00000559401 CCDC69A6NI79 296 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 ALDH5A1P51649 535 aaPredicted RBP9.53□□□□□ -0.88
SNX1-207ENST00000559401 RTP1P59025 263 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 RPS6P62753 249 aaKnown RBP9.53□□□□□ -0.88
SNX1-207ENST00000559401 TNFAIP2Q03169 654 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 PDE4DQ08499 809 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 GRM4Q14833 912 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 CLEC4DQ8WXI8 215 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 PIBF1Q8WXW3 757 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 MYL10Q9BUA6 226 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 AMNQ9BXJ7 453 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 JMJD4Q9H9V9 463 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 PRKAG2Q9UGJ0 569 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 MAD2L2Q9UI95 211 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 ASTN1O14525 1302 aa9.53□□□□□ -0.88
SNX1-207ENST00000559401 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 B4DLN1 442 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 DUSP11O75319 330 aaKnown RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 CFBP00751 764 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 MRPL12P52815 198 aaKnown RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 NECTIN1Q15223 517 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 HABP4Q5JVS0 413 aaKnown RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 SLC39A5Q6ZMH5 540 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 MCF2L2Q86YR7 1114 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 ZNF654Q8IZM8 581 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 VTI1AQ96AJ9 217 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 LRRC2Q9BYS8 371 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 AP5M1Q9H0R1 490 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 VTA1Q9NP79 307 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 PRDM5Q9NQX1 630 aaPredicted RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 GPHNQ9NQX3 736 aaPredicted RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 PPP4R2Q9NY27 417 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 PHF24Q9UPV7 400 aa9.52□□□□□ -0.89
SNX1-207ENST00000559401 MRPL11Q9Y3B7 192 aaKnown RBP9.52□□□□□ -0.89
SNX1-207ENST00000559401 BAZ2BQ9UIF8 2168 aaKnown RBP9.51□□□□□ -0.89
SNX1-207ENST00000559401 A0A1W2PQ45 241 aaPredicted RBP9.51□□□□□ -0.89
SNX1-207ENST00000559401 A0A1W2PQY0 241 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 MYADML2A6NDP7 307 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms