RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 TLK2Q86UE8 772 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 FAM160B2Q86V87 743 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 NACAP1Q9BZK3 213 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 HIPK3Q9H422 1215 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 CXXC1Q9P0U4 656 aaPredicted RBP19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 MSRAQ9UJ68 235 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
CDC42BPB-205ENST00000559245 SCN5AQ14524 2016 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 FGBP02675 491 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 SLC1A4P43007 532 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 ITGA7Q13683 1181 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 FSCN1Q16658 493 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 LRRFIP1Q32MZ4 808 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 TKFCQ3LXA3 575 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 STAG1Q8WVM7 1258 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 GMCL1Q96IK5 515 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 SEC62Q99442 399 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 AP5M1Q9H0R1 490 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 MTIF3Q9H2K0 278 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 DCTPP1Q9H773 170 aa19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-205ENST00000559245 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 CHD7Q9P2D1 2997 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 SLC3A2P08195 630 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 ALAS1P13196 640 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 SMPD1P17405 629 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 PTGS1P23219 599 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 MCCP23508 829 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 PPARAQ07869 468 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 ADGRE1Q14246 886 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 ATXN2LQ8WWM7 1075 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 NAPBQ9H115 298 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 NKX2-4Q9H2Z4 354 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 THEGQ9P2T0 379 aa19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 DDX49Q9Y6V7 483 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-205ENST00000559245 GRIN2DO15399 1336 aa19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 DYNC1LI2O43237 492 aaPredicted RBP19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 ZEB2O60315 1214 aa19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 PLA2G6O60733 806 aa19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 KCTD1Q719H9 257 aa19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 OTOP2Q7RTS6 562 aa19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 PDGFCQ9NRA1 345 aa19.29■□□□□ 0.68
CDC42BPB-205ENST00000559245 IGFBP4P22692 258 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 CCL23P55773 120 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 SNAP25P60880 206 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 CCDC85BQ15834 202 aaPredicted RBP19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 MUM1L1Q5H9M0 696 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 IQSEC1Q6DN90 963 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 TAPT1Q6NXT6 567 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 EEPD1Q7L9B9 569 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 FBXO16Q8IX29 292 aaPredicted RBP19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 NOC4LQ9BVI4 516 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 TRPV6Q9H1D0 765 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 SLC28A3Q9HAS3 691 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 CYP39A1Q9NYL5 469 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 YBX2Q9Y2T7 364 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 BDP1A6H8Y1 2624 aa19.28■□□□□ 0.68
CDC42BPB-205ENST00000559245 B4GALT4O60513 344 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 PPP4R3BQ5MIZ7 849 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 TMEM63BQ5T3F8 832 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 RCSD1Q6JBY9 416 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 ASB2Q96Q27 587 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 WNT8AQ9H1J5 351 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 PRR12Q9ULL5 1215 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 Q9Y3F1 56 aa19.27■□□□□ 0.68
CDC42BPB-205ENST00000559245 REV3LO60673 3130 aa19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 PSMC6P62333 389 aa19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 ZMYM1Q5SVZ6 1142 aa19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 VTA1Q9NP79 307 aa19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 IL17RBQ9NRM6 502 aa19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.26■□□□□ 0.67
CDC42BPB-205ENST00000559245 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 TRIP12Q14669 1992 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 SCN10AQ9Y5Y9 1956 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 RABGGTBP53611 331 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 MRPS5P82675 430 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 NSMFQ6X4W1 530 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 KIAA1211Q6ZU35 1233 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 RASGRP2Q7LDG7 609 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 RPUSD2Q8IZ73 545 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 PURBQ96QR8 312 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 FSD1Q9BTV5 496 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 CCPG1Q9ULG6 757 aa19.25■□□□□ 0.67
CDC42BPB-205ENST00000559245 PRRC2BQ5JSZ5 2229 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 TRANK1O15050 2925 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 ERC2O15083 957 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 NMT2O60551 498 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 COL9A1P20849 921 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 CTDSPL2Q05D32 466 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 PI4K2BQ8TCG2 481 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 ADAMTS19Q8TE59 1207 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 MORC4Q8TE76 937 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 SCLYQ96I15 445 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 INCENPQ9NQS7 918 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms