RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 DCAF4Q8WV16 495 aa12.64□□□□□ -0.39
CCDC33-207ENST00000559243 CDX2Q99626 313 aaPredicted RBP12.64□□□□□ -0.39
CCDC33-207ENST00000559243 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
CCDC33-207ENST00000559243 ARVCFO00192 962 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 FGAP02671 866 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 NOVP48745 357 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 BEX3Q00994 111 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 RRP12Q5JTH9 1297 aaKnown RBP12.63□□□□□ -0.39
CCDC33-207ENST00000559243 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 TTYH1Q9H313 450 aaPredicted RBP12.63□□□□□ -0.39
CCDC33-207ENST00000559243 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
CCDC33-207ENST00000559243 A0A0D9SFI3 127 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 CTAGE5O15320 804 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 TLR3O15455 904 aaKnown RBP12.62□□□□□ -0.39
CCDC33-207ENST00000559243 ICAM1P05362 532 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
CCDC33-207ENST00000559243 COL9A1P20849 921 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 SLC16A2P36021 539 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 NKX3-2P78367 333 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 MFSD5Q6N075 450 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 TLK2Q86UE8 772 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
CCDC33-207ENST00000559243 ASTN1O14525 1302 aa12.62□□□□□ -0.39
CCDC33-207ENST00000559243 TMEM265A0A087WTH1 108 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 ZEB2O60315 1214 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 CABYRO75952 493 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 SMPD1P17405 629 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 SYDE2Q5VT97 1194 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 IQSEC1Q6DN90 963 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 TTBK2Q6IQ55 1244 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 BTNL9Q6UXG8 535 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 EEPD1Q7L9B9 569 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 FAM126BQ8IXS8 530 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 TMEM199Q8N511 208 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 MYLIPQ8WY64 445 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 TMEM47Q9BQJ4 181 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 RANBP17Q9H2T7 1088 aaKnown RBP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
CCDC33-207ENST00000559243 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
CCDC33-207ENST00000559243 DYNC1LI2O43237 492 aaPredicted RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 HAND2P61296 217 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 TAPT1Q6NXT6 567 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 MAFAQ8NHW3 353 aaPredicted RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
CCDC33-207ENST00000559243 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
CCDC33-207ENST00000559243 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 LCTP09848 1927 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 CD4P01730 458 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 CSF2RAP15509 400 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 DNAJB2P25686 324 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 MFAP1P55081 439 aaKnown RBP12.59□□□□□ -0.39
CCDC33-207ENST00000559243 ITGA7Q13683 1181 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 AAMPQ13685 434 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
CCDC33-207ENST00000559243 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 KIAA1211Q6ZU35 1233 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 C16orf59Q7L2K0 433 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 SLC43A3Q8NBI5 491 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 MORC4Q8TE76 937 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 TTC14Q96N46 770 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 Q9Y3F1 56 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 LRRC37A2A6NM11 1700 aa12.59□□□□□ -0.39
CCDC33-207ENST00000559243 PTPDC1A2A3K4 754 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 NFIBO00712 420 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 PDHBP11177 359 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 PCP11498 1178 aaKnown RBP12.58□□□□□ -0.4
CCDC33-207ENST00000559243 FOSL2P15408 326 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 PTGS1P23219 599 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 CYP2C18P33260 490 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
CCDC33-207ENST00000559243 TMEM240Q5SV17 173 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 AKNAD1Q5T1N1 836 aa12.58□□□□□ -0.4
CCDC33-207ENST00000559243 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms