RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 FGAP02671 866 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 SNAP25P60880 206 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 MCMDC2Q4G0Z9 681 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 MUM1L1Q5H9M0 696 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.02■□□□□ 0.48
IRF9-204ENST00000559229 DCAF4Q8WV16 495 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 CRBNQ96SW2 442 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 TCP11L1Q9NUJ3 509 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 CYP39A1Q9NYL5 469 aa18.02■□□□□ 0.48
IRF9-204ENST00000559229 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
IRF9-204ENST00000559229 ICAM1P05362 532 aa18.01■□□□□ 0.47
IRF9-204ENST00000559229 BTNL9Q6UXG8 535 aa18.01■□□□□ 0.47
IRF9-204ENST00000559229 NOL8Q76FK4 1167 aaKnown RBP18.01■□□□□ 0.47
IRF9-204ENST00000559229 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
IRF9-204ENST00000559229 FAM227BQ96M60 508 aa18.01■□□□□ 0.47
IRF9-204ENST00000559229 CCPG1Q9ULG6 757 aa18.01■□□□□ 0.47
IRF9-204ENST00000559229 ASTN1O14525 1302 aa18■□□□□ 0.47
IRF9-204ENST00000559229 TLR3O15455 904 aaKnown RBP18■□□□□ 0.47
IRF9-204ENST00000559229 CABYRO75952 493 aa18■□□□□ 0.47
IRF9-204ENST00000559229 TOP1P11387 765 aaKnown RBP18■□□□□ 0.47
IRF9-204ENST00000559229 BEX3Q00994 111 aa18■□□□□ 0.47
IRF9-204ENST00000559229 PPIGQ13427 754 aaKnown RBP eCLIP18■□□□□ 0.477e-7■■■■■ 31.5
IRF9-204ENST00000559229 CCDC96Q2M329 555 aa18■□□□□ 0.47
IRF9-204ENST00000559229 IQSEC1Q6DN90 963 aa18■□□□□ 0.47
IRF9-204ENST00000559229 TAPT1Q6NXT6 567 aa18■□□□□ 0.47
IRF9-204ENST00000559229 FAM126BQ8IXS8 530 aa18■□□□□ 0.47
IRF9-204ENST00000559229 SLC43A3Q8NBI5 491 aa18■□□□□ 0.47
IRF9-204ENST00000559229 RANBP17Q9H2T7 1088 aaKnown RBP18■□□□□ 0.47
IRF9-204ENST00000559229 TOMM22Q9NS69 142 aa18■□□□□ 0.47
IRF9-204ENST00000559229 MTMR7Q9Y216 660 aa18■□□□□ 0.47
IRF9-204ENST00000559229 Q9Y3F1 56 aa18■□□□□ 0.47
IRF9-204ENST00000559229 A0A0D9SFI3 127 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 CD4P01730 458 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 HSPD1P10809 573 aaKnown RBP17.99■□□□□ 0.47
IRF9-204ENST00000559229 SMPD1P17405 629 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 FSCN1Q16658 493 aaKnown RBP17.99■□□□□ 0.47
IRF9-204ENST00000559229 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 NSMFQ6X4W1 530 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 C16orf59Q7L2K0 433 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 TLK2Q86UE8 772 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 TMEM199Q8N511 208 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 MYLIPQ8WY64 445 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 TMEM47Q9BQJ4 181 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.473e-6■□□□□ 9.9
IRF9-204ENST00000559229 AP5M1Q9H0R1 490 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 PDGFCQ9NRA1 345 aa17.99■□□□□ 0.47
IRF9-204ENST00000559229 SPTBN5Q9NRC6 3674 aaKnown RBP17.99■□□□□ 0.47
IRF9-204ENST00000559229 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 DYNC1LI2O43237 492 aaPredicted RBP17.98■□□□□ 0.47
IRF9-204ENST00000559229 ZEB2O60315 1214 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 SLC16A2P36021 539 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
IRF9-204ENST00000559229 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 CXCL17Q6UXB2 119 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 MAFAQ8NHW3 353 aaPredicted RBP17.98■□□□□ 0.47
IRF9-204ENST00000559229 TTC14Q96N46 770 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 VTA1Q9NP79 307 aa17.98■□□□□ 0.47
IRF9-204ENST00000559229 DDX49Q9Y6V7 483 aaKnown RBP17.98■□□□□ 0.47
IRF9-204ENST00000559229 LOC102724159A0A0B4J2E5 919 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 PCP11498 1178 aaKnown RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 CSF2RAP15509 400 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 DNAJB2P25686 324 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 ITGA7Q13683 1181 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 BAATQ14032 418 aaPredicted RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 PWP2Q15269 919 aaKnown RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 EEPD1Q7L9B9 569 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 FBXO16Q8IX29 292 aaPredicted RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 PURBQ96QR8 312 aaKnown RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 ADD3Q9UEY8 706 aaKnown RBP17.97■□□□□ 0.47
IRF9-204ENST00000559229 MCM3APO60318 1980 aa17.97■□□□□ 0.47
IRF9-204ENST00000559229 NMIQ13287 307 aaPredicted RBP17.96■□□□□ 0.47
IRF9-204ENST00000559229 AAMPQ13685 434 aa17.96■□□□□ 0.47
IRF9-204ENST00000559229 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
IRF9-204ENST00000559229 PPP1R12CQ9BZL4 782 aa17.96■□□□□ 0.47
IRF9-204ENST00000559229 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
IRF9-204ENST00000559229 PNMA2Q9UL42 364 aa17.96■□□□□ 0.47
IRF9-204ENST00000559229 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
IRF9-204ENST00000559229 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 PDHBP11177 359 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 FOSL2P15408 326 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 PTGS1P23219 599 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 GRIN2CQ14957 1233 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 DUSP28Q4G0W2 176 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 TMEM63BQ5T3F8 832 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 PSRC1Q6PGN9 363 aaPredicted RBP17.95■□□□□ 0.46
IRF9-204ENST00000559229 MFSD6Q6ZSS7 791 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 FRMPD2Q68DX3 1309 aaPredicted RBP17.95■□□□□ 0.46
IRF9-204ENST00000559229 CCDC171Q6TFL3 1326 aa17.95■□□□□ 0.46
IRF9-204ENST00000559229 PTPDC1A2A3K4 754 aa17.94■□□□□ 0.46
IRF9-204ENST00000559229 NFIBO00712 420 aa17.94■□□□□ 0.46
IRF9-204ENST00000559229 SNHG28P0DPA3 235 aa17.94■□□□□ 0.46
IRF9-204ENST00000559229 CYP2C18P33260 490 aa17.94■□□□□ 0.46
IRF9-204ENST00000559229 ALDH5A1P51649 535 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms