RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 BLOC1S2Q6QNY1 142 aa21.79■■□□□ 1.08
CASC4-209ENST00000559222 MICU3Q86XE3 530 aa21.79■■□□□ 1.08
CASC4-209ENST00000559222 ANKRD35Q8N283 1001 aa21.79■■□□□ 1.08
CASC4-209ENST00000559222 PIBF1Q8WXW3 757 aa21.79■■□□□ 1.08
CASC4-209ENST00000559222 MTMR8Q96EF0 704 aa21.79■■□□□ 1.08
CASC4-209ENST00000559222 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.79■■□□□ 1.08
CASC4-209ENST00000559222 TNRC18O15417 2968 aaPredicted RBP21.78■■□□□ 1.08
CASC4-209ENST00000559222 TKFCQ3LXA3 575 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 PRAMEF19Q5SWL8 479 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 OLFML2BQ68BL8 750 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 NSMFQ6X4W1 530 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 SLC30A10Q6XR72 485 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 Q6ZUG5 572 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 HOMER1Q86YM7 354 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 DDX11Q96FC9 970 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 PIGSQ96S52 555 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 UPF3BQ9BZI7 483 aaKnown RBP21.78■■□□□ 1.08
CASC4-209ENST00000559222 PAK6Q9NQU5 681 aaPredicted RBP21.78■■□□□ 1.08
CASC4-209ENST00000559222 FBXO40Q9UH90 709 aa21.78■■□□□ 1.08
CASC4-209ENST00000559222 APOBRQ0VD83 1088 aa21.77■■□□□ 1.08
CASC4-209ENST00000559222 TRMT44Q8IYL2 757 aaKnown RBP21.77■■□□□ 1.08
CASC4-209ENST00000559222 SRBD1Q8N5C6 995 aaKnown RBP21.77■■□□□ 1.08
CASC4-209ENST00000559222 RIOX1Q9H6W3 641 aa21.77■■□□□ 1.08
CASC4-209ENST00000559222 CYP39A1Q9NYL5 469 aa21.77■■□□□ 1.08
CASC4-209ENST00000559222 SLC12A7Q9Y666 1083 aa21.77■■□□□ 1.08
CASC4-209ENST00000559222 KLF18A0A0U1RQI7 1052 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 SOWAHBA6NEL2 793 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
CASC4-209ENST00000559222 CYBAP13498 195 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 RGS19P49795 217 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 MFSD14CQ5VZR4 134 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 TMTC2Q8N394 836 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 FAM133AQ8N9E0 248 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 CTCFLQ8NI51 663 aaPredicted RBP21.76■■□□□ 1.07
CASC4-209ENST00000559222 TBC1D5Q92609 795 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 BRF1Q92994 677 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 DEFB118Q96PH6 123 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 MAP3K14Q99558 947 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 TMEM106CQ9BVX2 250 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 ZSWIM6Q9HCJ5 1215 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 RPTORQ8N122 1335 aa21.76■■□□□ 1.07
CASC4-209ENST00000559222 BAATQ14032 418 aaPredicted RBP21.75■■□□□ 1.07
CASC4-209ENST00000559222 HMX1Q9NP08 348 aaPredicted RBP21.75■■□□□ 1.07
CASC4-209ENST00000559222 hCG_1642624A0A1W2PR95 340 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 POTEB2H3BUK9 544 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 OPLAHO14841 1288 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 ZBTB5O15062 677 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 GJB1P08034 283 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 TOB2Q14106 344 aaPredicted RBP21.74■■□□□ 1.07
CASC4-209ENST00000559222 RUFY3Q7L099 469 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 FBXO11Q86XK2 927 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 U2AF1L4Q8WU68 220 aaKnown RBP21.74■■□□□ 1.07
CASC4-209ENST00000559222 LARP6Q9BRS8 491 aaKnown RBP21.74■■□□□ 1.07
CASC4-209ENST00000559222 TINF2Q9BSI4 451 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 AGXT2Q9BYV1 514 aa21.74■■□□□ 1.07
CASC4-209ENST00000559222 FAM217BQ9NTX9 383 aaPredicted RBP21.74■■□□□ 1.07
CASC4-209ENST00000559222 DIS3Q9Y2L1 958 aaKnown RBP21.74■■□□□ 1.07
CASC4-209ENST00000559222 PSMA5P28066 241 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 CDC27P30260 824 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 TMTC3Q6ZXV5 915 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 FANCBQ8NB91 859 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 SPZ1Q9BXG8 430 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 SLC5A4Q9NY91 659 aa21.73■■□□□ 1.07
CASC4-209ENST00000559222 NAP1L2Q9ULW6 460 aaPredicted RBP21.73■■□□□ 1.07
CASC4-209ENST00000559222 PTPDC1A2A3K4 754 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 GOLGA8AA7E2F4 631 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 GOLGA8BA8MQT2 603 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 ZBTB43O43298 467 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 SNAI1O95863 264 aaPredicted RBP21.72■■□□□ 1.07
CASC4-209ENST00000559222 KIF5BP33176 963 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 GJA8P48165 433 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 FGD1P98174 961 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 ANO1Q5XXA6 986 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 TM6SF1Q9BZW5 370 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 COL20A1Q9P218 1284 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 PFASO15067 1338 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 ABCB11O95342 1321 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 CNTNAP5Q8WYK1 1306 aa21.72■■□□□ 1.07
CASC4-209ENST00000559222 SGPL1O95470 568 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 CALM1P0DP23 149 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 CALM2P0DP24 149 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 CALM3P0DP25 149 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 CALML3P27482 149 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
CASC4-209ENST00000559222 RTN1Q16799 776 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 LHX8Q68G74 356 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 LENG1Q96BZ8 264 aaPredicted RBP21.71■■□□□ 1.07
CASC4-209ENST00000559222 AMNQ9BXJ7 453 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 CYP46A1Q9Y6A2 500 aa21.71■■□□□ 1.07
CASC4-209ENST00000559222 CNGA1P29973 690 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 FUT2Q10981 343 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 MAMDC4Q6UXC1 1216 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 RNF207Q6ZRF8 634 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 ARMCX2Q7L311 632 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 CRISPLD2Q9H0B8 497 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.7■■□□□ 1.06
CASC4-209ENST00000559222 PCDHA1Q9Y5I3 950 aa21.7■■□□□ 1.06
CASC4-209ENST00000559222 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
CASC4-209ENST00000559222 ZNF865P0CJ78 1059 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms