RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CCDC178Q5BJE1 867 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 CCDC122Q5T0U0 273 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 ZBTB9Q96C00 473 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 EEF2KMTQ96G04 330 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 SETDB2Q96T68 719 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 GBP3Q9H0R5 595 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 CUEDC2Q9H467 287 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 ZBTB22O15209 634 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 LDHBP07195 334 aaKnown RBP18.57■□□□□ 0.56
SPG11-215ENST00000559193 TSR1Q2NL82 804 aaKnown RBP18.57■□□□□ 0.56
SPG11-215ENST00000559193 WDR93Q6P2C0 686 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 P2RX5Q93086 422 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 TRIM9Q9C026 710 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 CPVLQ9H3G5 476 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 MAGEF1Q9HAY2 307 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 NARFQ9UHQ1 456 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
SPG11-215ENST00000559193 EIF3JO75822 258 aaKnown RBP18.56■□□□□ 0.56
SPG11-215ENST00000559193 OR52Z1P0C646 297 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 RASA1P20936 1047 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 CCNE1P24864 410 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 STK4Q13043 487 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 ZNF662Q6ZS27 426 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 CNOT6LQ96LI5 555 aaKnown RBP18.56■□□□□ 0.56
SPG11-215ENST00000559193 AK8Q96MA6 479 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 ZMYND12Q9H0C1 365 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 MYH1P12882 1939 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 NAV1Q8NEY1 1877 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 RCCD1A6NED2 376 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 TUBBP07437 444 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 PDE4DQ08499 809 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 PAPD7Q5XG87 772 aaKnown RBP18.56■□□□□ 0.56
SPG11-215ENST00000559193 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 BARGINQ6ZT62 677 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 TGFBRAP1Q8WUH2 860 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 VPS18Q9P253 973 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 SBF2Q86WG5 1849 aa18.56■□□□□ 0.56
SPG11-215ENST00000559193 TRIM21P19474 475 aaKnown RBP18.55■□□□□ 0.56
SPG11-215ENST00000559193 KRT83P78385 493 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 MUM1L1Q5H9M0 696 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
SPG11-215ENST00000559193 JAKMIP2Q96AA8 810 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 MMS19Q96T76 1030 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 LACRTQ9GZZ8 138 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 KLRF2D3W0D1 207 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 NKRFO15226 690 aaKnown RBP eCLIP18.55■□□□□ 0.56
SPG11-215ENST00000559193 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 FCER1AP12319 257 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 LMAN1P49257 510 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 USP14P54578 494 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 LETM2Q2VYF4 491 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 MIIPQ5JXC2 388 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 C7orf25Q9BPX7 421 aa18.55■□□□□ 0.56
SPG11-215ENST00000559193 BICDL2A1A5D9 508 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 LRRIQ3A6PVS8 624 aaPredicted RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 CCNT1O60563 726 aaKnown RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 CYLC1P35663 651 aaPredicted RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 NAPAP54920 295 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 ASIC1P78348 528 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 ZBED6P86452 979 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 TBC1D8BQ0IIM8 1120 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 KRT25Q7Z3Z0 450 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 WDR66Q8TBY9 1149 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 LZTS2Q9BRK4 669 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 NUP58Q9BVL2 599 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 SPZ1Q9BXG8 430 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 NHEJ1Q9H9Q4 299 aaPredicted RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 SAP30BPQ9UHR5 308 aaKnown RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 SAR1BQ9Y6B6 198 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 TNRC6CQ9HCJ0 1690 aaKnown RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 NONOQ15233 471 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPG11-215ENST00000559193 MAPKAPK5Q8IW41 473 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 RETREG2Q8NC44 543 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
SPG11-215ENST00000559193 FAN1Q9Y2M0 1017 aa18.54■□□□□ 0.56
SPG11-215ENST00000559193 EIF3CLB5ME19 914 aaKnown RBP18.53■□□□□ 0.56
SPG11-215ENST00000559193 PPP4CP60510 307 aa18.53■□□□□ 0.56
SPG11-215ENST00000559193 EHBP1Q8NDI1 1231 aa18.53■□□□□ 0.56
SPG11-215ENST00000559193 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
SPG11-215ENST00000559193 MMTAG2Q9BU76 263 aaKnown RBP18.53■□□□□ 0.56
SPG11-215ENST00000559193 KRT86O43790 486 aa18.53■□□□□ 0.56
SPG11-215ENST00000559193 ZSCAN26Q16670 478 aa18.53■□□□□ 0.56
SPG11-215ENST00000559193 TPTE2Q6XPS3 522 aa18.53■□□□□ 0.56
SPG11-215ENST00000559193 FAM114A1Q8IWE2 563 aa18.53■□□□□ 0.56
SPG11-215ENST00000559193 ZSCAN29Q8IWY8 852 aaPredicted RBP18.53■□□□□ 0.56
SPG11-215ENST00000559193 CCDC47Q96A33 483 aaKnown RBP18.53■□□□□ 0.56
SPG11-215ENST00000559193 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
SPG11-215ENST00000559193 TULP2O00295 520 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 BAG3O95817 575 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 MTIF2P46199 727 aaKnown RBP18.52■□□□□ 0.56
SPG11-215ENST00000559193 PTF1AQ7RTS3 328 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 CCDC170Q8IYT3 715 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 KIAA0895Q8NCT3 520 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 HPS3Q969F9 1004 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 PURBQ96QR8 312 aaKnown RBP18.52■□□□□ 0.56
SPG11-215ENST00000559193 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.56
SPG11-215ENST00000559193 SMCO2A6NFE2 343 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms