RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SYCP1Q15431 976 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 NAALADL2Q58DX5 795 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 JAKMIP3Q5VZ66 844 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 BAG1Q99933 345 aaPredicted RBP12.71□□□□□ -0.37
CLPX-204ENST00000559152 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 CTIFO43310 598 aaKnown RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 ENTPD3O75355 529 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 RHOBTB3O94955 611 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 TPM1P09493 284 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.381e-9■■■□□ 18.6
CLPX-204ENST00000559152 STX17P56962 302 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 PDIA5Q14554 519 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 CALCRLQ16602 461 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 HSP90AA4PQ58FG1 418 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 MCTP2Q6DN12 878 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 TATDN1Q6P1N9 297 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 ZSCAN29Q8IWY8 852 aaPredicted RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 IGSF22Q8N9C0 903 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 NELFBQ8WX92 580 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 ADD3Q9UEY8 706 aaKnown RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 ITIH6Q6UXX5 1313 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 PPP4R3AQ6IN85 833 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 TMEM179Q6ZVK1 233 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 SMYD4Q8IYR2 804 aaPredicted RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 NOC3LQ8WTT2 800 aaKnown RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 ZNF592Q92610 1267 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 COA7Q96BR5 231 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 PANX2Q96RD6 677 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
CLPX-204ENST00000559152 LRRC27Q9C0I9 530 aa12.7□□□□□ -0.38
CLPX-204ENST00000559152 AKR1B15C9JRZ8 316 aaPredicted RBP12.69□□□□□ -0.38
CLPX-204ENST00000559152 PSMA7O14818 248 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 TECP42680 631 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
CLPX-204ENST00000559152 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 CCDC51Q96ER9 411 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 C7orf25Q9BPX7 421 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 KCNQ5Q9NR82 932 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 STK17AQ9UEE5 414 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLPX-204ENST00000559152 PP2D1A8MPX8 630 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 PLCG1P19174 1290 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 SLC1A4P43007 532 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 GIMAP8Q8ND71 665 aaPredicted RBP12.69□□□□□ -0.38
CLPX-204ENST00000559152 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
CLPX-204ENST00000559152 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 TMEM260Q9NX78 707 aa12.69□□□□□ -0.38
CLPX-204ENST00000559152 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
CLPX-204ENST00000559152 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
CLPX-204ENST00000559152 CHRNA5P30532 468 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 TXKP42681 527 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 PRCPP42785 496 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 CLK2P49760 499 aaKnown RBP12.68□□□□□ -0.38
CLPX-204ENST00000559152 TCP10Q12799 353 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 TRIM14Q14142 442 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 CNGA4Q8IV77 575 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 LRWD1Q9UFC0 647 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 MYH8P13535 1937 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 ATRNL1Q5VV63 1379 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
CLPX-204ENST00000559152 N4BP3O15049 544 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
CLPX-204ENST00000559152 PBX1P40424 430 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 AOC3Q16853 763 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 SLFN13Q68D06 897 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 CLEC10AQ8IUN9 316 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 GMCL1P1Q8NEA9 526 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 CDK5RAP3Q96JB5 506 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 THAP9Q9H5L6 903 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 TMOD2Q9NZR1 351 aa12.68□□□□□ -0.38
CLPX-204ENST00000559152 GREB1LQ9C091 1923 aaPredicted RBP12.67□□□□□ -0.38
CLPX-204ENST00000559152 KCNJ18B7U540 433 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 USP17L10C9JJH3 530 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 PPIP5K2O43314 1243 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 SLC26A4O43511 780 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 KLRC4O43908 158 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 BAG6P46379 1132 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 TNNI2P48788 182 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 ICA1Q05084 483 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 KCNJ12Q14500 433 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 ABCB5Q2M3G0 1257 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms