RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RNF180Q86T96 592 aa15.53■□□□□ 0.08
CASC4-208ENST00000559151 USHBP1Q8N6Y0 703 aa15.53■□□□□ 0.08
CASC4-208ENST00000559151 UBR7Q8N806 425 aa15.53■□□□□ 0.08
CASC4-208ENST00000559151 SCLYQ96I15 445 aa15.53■□□□□ 0.08
CASC4-208ENST00000559151 CAAP1Q9H8G2 361 aa15.53■□□□□ 0.08
CASC4-208ENST00000559151 RNF112Q9ULX5 631 aa15.53■□□□□ 0.08
CASC4-208ENST00000559151 RAB11FIP3O75154 756 aa15.52■□□□□ 0.08
CASC4-208ENST00000559151 KCNT2Q6UVM3 1135 aa15.52■□□□□ 0.08
CASC4-208ENST00000559151 TNPO3Q9Y5L0 923 aaKnown RBP15.52■□□□□ 0.08
CASC4-208ENST00000559151 ZNF205O95201 554 aa15.51■□□□□ 0.07
CASC4-208ENST00000559151 DOC2BQ14184 412 aa15.51■□□□□ 0.07
CASC4-208ENST00000559151 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
CASC4-208ENST00000559151 DCAF4Q8WV16 495 aa15.51■□□□□ 0.07
CASC4-208ENST00000559151 UBE2FQ969M7 185 aa15.51■□□□□ 0.07
CASC4-208ENST00000559151 FOXP3Q9BZS1 431 aa15.51■□□□□ 0.07
CASC4-208ENST00000559151 TMEFF2Q9UIK5 374 aaPredicted RBP15.51■□□□□ 0.07
CASC4-208ENST00000559151 GSTM1P09488 218 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 POU3F3P20264 500 aaPredicted RBP15.5■□□□□ 0.07
CASC4-208ENST00000559151 SOX5P35711 763 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 SEPHS1P49903 392 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 CLCN7P51798 805 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 ZNF460Q14592 562 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 RTP2Q5QGT7 225 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 PLD6Q8N2A8 252 aaKnown RBP15.5■□□□□ 0.07
CASC4-208ENST00000559151 TCFL5Q9UL49 500 aa15.5■□□□□ 0.07
CASC4-208ENST00000559151 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 ARNTLO00327 626 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 GSC2O15499 205 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 RASGRP1O95267 797 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 PCBP3P57721 371 aaKnown RBP15.49■□□□□ 0.07
CASC4-208ENST00000559151 GAB4Q2WGN9 574 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 THAP5Q7Z6K1 395 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 JAMLQ86YT9 394 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 LINC00116Q8NCU8 138 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 SEMA3GQ9NS98 782 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 CLEC1BQ9P126 229 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 MAPRE3Q9UPY8 281 aa15.49■□□□□ 0.07
CASC4-208ENST00000559151 MEFVO15553 781 aaPredicted RBP15.48■□□□□ 0.07
CASC4-208ENST00000559151 OPA1O60313 960 aa15.48■□□□□ 0.07
CASC4-208ENST00000559151 PLS3P13797 630 aa15.48■□□□□ 0.07
CASC4-208ENST00000559151 ACBD5Q5T8D3 534 aaPredicted RBP15.48■□□□□ 0.07
CASC4-208ENST00000559151 RCSD1Q6JBY9 416 aa15.48■□□□□ 0.07
CASC4-208ENST00000559151 KSR1Q8IVT5 923 aa15.48■□□□□ 0.07
CASC4-208ENST00000559151 DDX1Q92499 740 aaKnown RBP15.48■□□□□ 0.07
CASC4-208ENST00000559151 DUSP13Q9UII6 198 aa15.48■□□□□ 0.07
CASC4-208ENST00000559151 FKTNO75072 461 aa15.47■□□□□ 0.07
CASC4-208ENST00000559151 H2AFB1P0C5Y9 115 aa15.47■□□□□ 0.07
CASC4-208ENST00000559151 H2AFB2P0C5Z0 115 aa15.47■□□□□ 0.07
CASC4-208ENST00000559151 CPSF6Q16630 551 aaKnown RBP eCLIP15.47■□□□□ 0.07
CASC4-208ENST00000559151 CT47A1Q5JQC4 288 aaPredicted RBP15.47■□□□□ 0.07
CASC4-208ENST00000559151 CCDC103Q8IW40 242 aa15.47■□□□□ 0.07
CASC4-208ENST00000559151 PHF20Q9BVI0 1012 aa15.47■□□□□ 0.07
CASC4-208ENST00000559151 SSU72P8A0A1W2PR75 194 aa15.46■□□□□ 0.07
CASC4-208ENST00000559151 CYP26A1O43174 497 aa15.46■□□□□ 0.07
CASC4-208ENST00000559151 CRTAMO95727 393 aa15.46■□□□□ 0.07
CASC4-208ENST00000559151 ASLP04424 464 aa15.46■□□□□ 0.07
CASC4-208ENST00000559151 MAGEB10Q96LZ2 347 aaPredicted RBP15.46■□□□□ 0.07
CASC4-208ENST00000559151 AP5S1Q9NUS5 200 aa15.46■□□□□ 0.07
CASC4-208ENST00000559151 PCDHA9Q9Y5H5 950 aa15.46■□□□□ 0.07
CASC4-208ENST00000559151 AQP7O14520 342 aa15.45■□□□□ 0.06
CASC4-208ENST00000559151 LTKP29376 864 aa15.45■□□□□ 0.06
CASC4-208ENST00000559151 IFI16Q16666 785 aaKnown RBP15.45■□□□□ 0.06
CASC4-208ENST00000559151 NETO1Q8TDF5 533 aa15.45■□□□□ 0.06
CASC4-208ENST00000559151 PCDHA11Q9Y5I1 949 aa15.45■□□□□ 0.06
CASC4-208ENST00000559151 NPFFR2Q9Y5X5 522 aa15.45■□□□□ 0.06
CASC4-208ENST00000559151 TCRBV16S1A1N1A0A5B0 115 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 GDF11O95390 407 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 IGFALSP35858 605 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 CDKN1CP49918 316 aaPredicted RBP15.44■□□□□ 0.06
CASC4-208ENST00000559151 EEF1DP3Q658K8 133 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 ZDHHC13Q8IUH4 622 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 PPM1KQ8N3J5 372 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 ATP8A1Q9Y2Q0 1164 aa15.44■□□□□ 0.06
CASC4-208ENST00000559151 PITPNM2Q9BZ72 1349 aa15.43■□□□□ 0.06
CASC4-208ENST00000559151 NFKB2Q00653 900 aa15.43■□□□□ 0.06
CASC4-208ENST00000559151 TESK1Q15569 626 aa15.43■□□□□ 0.06
CASC4-208ENST00000559151 E4F1Q66K89 784 aaPredicted RBP15.43■□□□□ 0.06
CASC4-208ENST00000559151 RNF111Q6ZNA4 994 aa15.43■□□□□ 0.06
CASC4-208ENST00000559151 CDADC1Q9BWV3 514 aa15.43■□□□□ 0.06
CASC4-208ENST00000559151 DDX56Q9NY93 547 aaKnown RBP15.43■□□□□ 0.06
CASC4-208ENST00000559151 ZC3H7BQ9UGR2 993 aaKnown RBP15.43■□□□□ 0.06
CASC4-208ENST00000559151 MSCO60682 206 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 LCP1P13796 627 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 NEK4P51957 841 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 PCBP1Q15365 356 aaKnown RBP eCLIP15.42■□□□□ 0.06
CASC4-208ENST00000559151 MTDHQ86UE4 582 aaKnown RBP15.42■□□□□ 0.06
CASC4-208ENST00000559151 CREG2Q8IUH2 290 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 PRPF38AQ8NAV1 312 aaKnown RBP15.42■□□□□ 0.06
CASC4-208ENST00000559151 LEO1Q8WVC0 666 aaPredicted RBP15.42■□□□□ 0.06
CASC4-208ENST00000559151 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 ATP13A1Q9HD20 1204 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 PIM2Q9P1W9 311 aa15.42■□□□□ 0.06
CASC4-208ENST00000559151 FGF10O15520 208 aaPredicted RBP15.41■□□□□ 0.06
CASC4-208ENST00000559151 LTBRP36941 435 aa15.41■□□□□ 0.06
CASC4-208ENST00000559151 EVA1CP58658 441 aa15.41■□□□□ 0.06
CASC4-208ENST00000559151 GUCY1A3Q02108 690 aa15.41■□□□□ 0.06
CASC4-208ENST00000559151 NKAPLQ5M9Q1 402 aa15.41■□□□□ 0.06
CASC4-208ENST00000559151 RSPO2Q6UXX9 243 aaPredicted RBP15.41■□□□□ 0.06
CASC4-208ENST00000559151 ZPBP2Q6X784 338 aa15.41■□□□□ 0.06
CASC4-208ENST00000559151 DDX42Q86XP3 938 aaKnown RBP eCLIP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms