RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 POLR2AP24928 1970 aaKnown RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 GREB1LQ9C091 1923 aaPredicted RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 UBE2Q2LH0YL09 131 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 HLA-DOAP06340 250 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 PCP11498 1178 aaKnown RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 TFAP4Q01664 338 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 ST3GAL1Q11201 340 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 MOGSQ13724 837 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 PRKG1Q13976 671 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 TOB2Q14106 344 aaPredicted RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 VGLL4Q14135 290 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 SEPT2Q15019 361 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 SUPT20HL1Q3ZLR7 823 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 FBXL16Q8N461 479 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 ACER1Q8TDN7 264 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 ZNF296Q8WUU4 475 aaPredicted RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 ANKS1AQ92625 1134 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 JAKMIP1Q96N16 626 aaKnown RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 NEK1Q96PY6 1258 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 ZNF341Q9BYN7 854 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 UPF3BQ9BZI7 483 aaKnown RBP8.55□□□□□ -1.04
TRAF3-206ENST00000558880 TCP11L1Q9NUJ3 509 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 ZBTB21Q9ULJ3 1066 aa8.55□□□□□ -1.04
TRAF3-206ENST00000558880 LAMA4Q16363 1823 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 SH2B2O14492 632 aaPredicted RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 RAD21O60216 631 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 CTNND1O60716 968 aaKnown RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 UPP2O95045 317 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 GH2P01242 217 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 RPS6KB1P23443 525 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 SLC35G1Q2M3R5 365 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 CERKLQ49MI3 558 aaPredicted RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 FBXO46Q6PJ61 603 aaPredicted RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 MFSD6Q6ZSS7 791 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 DHX32Q7L7V1 743 aaKnown RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 SCYL3Q8IZE3 742 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 ENAHQ8N8S7 591 aaPredicted RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 CEP95Q96GE4 821 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 WRNIP1Q96S55 665 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 LY9Q9HBG7 655 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 MTMR4Q9NYA4 1195 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 BRPF3Q9ULD4 1205 aa8.54□□□□□ -1.04
TRAF3-206ENST00000558880 ANGEL1Q9UNK9 670 aaKnown RBP8.54□□□□□ -1.04
TRAF3-206ENST00000558880 LAMB1P07942 1786 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 MYH1P12882 1939 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 RANBP6O60518 1105 aaKnown RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 LILRA1O75019 489 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 PTPRAP18433 802 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 ADD1P35611 737 aaKnown RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 EVCP57679 992 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 RELBQ01201 579 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 PDE4BQ07343 736 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 ABCB5Q2M3G0 1257 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 RUFY3Q7L099 469 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 NCOA7Q8NI08 942 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 MKL1Q969V6 931 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 ZNF775Q96BV0 537 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 CCDC17Q96LX7 622 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 ALDH8A1Q9H2A2 487 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 RNF41Q9H4P4 317 aaPredicted RBP8.53□□□□□ -1.04
TRAF3-206ENST00000558880 PCDHB11Q9Y5F2 797 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 WDR19Q8NEZ3 1342 aa8.53□□□□□ -1.04
TRAF3-206ENST00000558880 PRC1O43663 620 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 LARGE1O95461 756 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 SNHG28P0DPA3 235 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 EEF2P13639 858 aaKnown RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 ZKSCAN1P17029 563 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 CASTP20810 708 aaKnown RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 AK2P54819 239 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 MCCD1P59942 119 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 FKBP1BP68106 108 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 KRT32Q14532 448 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 RNF20Q5VTR2 975 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 DCAF15Q66K64 600 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 TMEM179Q6ZVK1 233 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 Q6ZVU0 165 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 SGMS1Q86VZ5 419 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 RASAL3Q86YV0 1011 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 ZNF444Q8N0Y2 327 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 ESR2Q92731 530 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 ZSCAN10Q96SZ4 725 aaPredicted RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 TMEM47Q9BQJ4 181 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 TSEN34Q9BSV6 310 aaKnown RBP8.52□□□□□ -1.05
TRAF3-206ENST00000558880 WDR18Q9BV38 432 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 KRT23Q9C075 422 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 CNNM2Q9H8M5 875 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 MKNK2Q9HBH9 465 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 AFG3L2Q9Y4W6 797 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 TNKSO95271 1327 aa8.52□□□□□ -1.05
TRAF3-206ENST00000558880 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 TSPY2A6NKD2 308 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 GPR25O00155 361 aa8.51□□□□□ -1.05
TRAF3-206ENST00000558880 PPP1R12BO60237 982 aaPredicted RBP8.51□□□□□ -1.05
TRAF3-206ENST00000558880 ASNSP08243 561 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms