RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TNFAIP2Q03169 654 aa18.02■□□□□ 0.48
RPL28-206ENST00000558752 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
RPL28-206ENST00000558752 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
RPL28-206ENST00000558752 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.02■□□□□ 0.485e-10■■□□□ 11.9
RPL28-206ENST00000558752 PLA2G6O60733 806 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 FGAP02671 866 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
RPL28-206ENST00000558752 PCP11498 1178 aaKnown RBP18.01■□□□□ 0.47
RPL28-206ENST00000558752 SLC1A4P43007 532 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 NT5C2P49902 561 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 NKX3-2P78367 333 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 TFAP4Q01664 338 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 NMIQ13287 307 aaPredicted RBP18.01■□□□□ 0.47
RPL28-206ENST00000558752 GRIN2CQ14957 1233 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 RAB30Q15771 203 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 GMCL1Q96IK5 515 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 AP5M1Q9H0R1 490 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 MSRAQ9UJ68 235 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 PLIN4Q96Q06 1357 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 MUC3AQ02505 3323 aa18.01■□□□□ 0.47
RPL28-206ENST00000558752 ZMYM6O95789 1325 aa18■□□□□ 0.47
RPL28-206ENST00000558752 A0A0D9SFI3 127 aa18■□□□□ 0.47
RPL28-206ENST00000558752 MYADML2A6NDP7 307 aa18■□□□□ 0.47
RPL28-206ENST00000558752 FGRP09769 529 aa18■□□□□ 0.47
RPL28-206ENST00000558752 FAM126BQ8IXS8 530 aa18■□□□□ 0.47
RPL28-206ENST00000558752 FAM133AQ8N9E0 248 aa18■□□□□ 0.47
RPL28-206ENST00000558752 RNF146Q9NTX7 359 aa18■□□□□ 0.47
RPL28-206ENST00000558752 CCDC171Q6TFL3 1326 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 FOXP2O15409 715 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 TMEM240Q5SV17 173 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 VPS53Q5VIR6 699 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 IQSEC1Q6DN90 963 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 STX8Q9UNK0 236 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 Q9Y3F1 56 aa17.99■□□□□ 0.47
RPL28-206ENST00000558752 ORC4O43929 436 aa17.98■□□□□ 0.47
RPL28-206ENST00000558752 CSF2RAP15509 400 aa17.98■□□□□ 0.47
RPL28-206ENST00000558752 COL9A1P20849 921 aa17.98■□□□□ 0.47
RPL28-206ENST00000558752 RPUSD2Q8IZ73 545 aaKnown RBP17.98■□□□□ 0.47
RPL28-206ENST00000558752 IL23AQ9NPF7 189 aa17.98■□□□□ 0.47
RPL28-206ENST00000558752 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
RPL28-206ENST00000558752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPL28-206ENST00000558752 TSPY2A6NKD2 308 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 FGBP02675 491 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 ALAS1P13196 640 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 PDE4AP27815 886 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 FSCN1Q16658 493 aaKnown RBP17.97■□□□□ 0.47
RPL28-206ENST00000558752 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 TTC22Q5TAA0 569 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 CWC27Q6UX04 472 aaKnown RBP17.97■□□□□ 0.47
RPL28-206ENST00000558752 ZNF365Q70YC5 407 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 TLK2Q86UE8 772 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 FGD4Q96M96 766 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 PBX4Q9BYU1 374 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 KATNBL1Q9H079 304 aa17.97■□□□□ 0.47
RPL28-206ENST00000558752 ADD3Q9UEY8 706 aaKnown RBP17.97■□□□□ 0.47
RPL28-206ENST00000558752 ADCY6O43306 1168 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 CD4P01730 458 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 MCCP23508 829 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 BEX3Q00994 111 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 CNTN2Q02246 1040 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 ITGA7Q13683 1181 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 C16orf59Q7L2K0 433 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 ZNF589Q86UQ0 364 aaPredicted RBP17.96■□□□□ 0.47
RPL28-206ENST00000558752 RUFY2Q8WXA3 655 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 HERVK_113Q902F9 699 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 AGBL1Q96MI9 1066 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
RPL28-206ENST00000558752 HIPK3Q9H422 1215 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 RNF41Q9H4P4 317 aaPredicted RBP17.96■□□□□ 0.47
RPL28-206ENST00000558752 CTNNA3Q9UI47 895 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 PNMA2Q9UL42 364 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 MCM3APO60318 1980 aa17.96■□□□□ 0.47
RPL28-206ENST00000558752 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 DYNC1LI2O43237 492 aaPredicted RBP17.95■□□□□ 0.46
RPL28-206ENST00000558752 ACRP10323 421 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 CTDSPL2Q05D32 466 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
RPL28-206ENST00000558752 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 ATXN2LQ8WWM7 1075 aaKnown RBP17.95■□□□□ 0.46
RPL28-206ENST00000558752 DSCC1Q9BVC3 393 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 TSPYL2Q9H2G4 693 aaPredicted RBP17.95■□□□□ 0.46
RPL28-206ENST00000558752 SLC28A3Q9HAS3 691 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 VTA1Q9NP79 307 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
RPL28-206ENST00000558752 GNEQ9Y223 722 aaKnown RBP17.95■□□□□ 0.46
RPL28-206ENST00000558752 SOWAHBA6NEL2 793 aa17.94■□□□□ 0.46
RPL28-206ENST00000558752 ZNF213O14771 459 aa17.94■□□□□ 0.46
RPL28-206ENST00000558752 CTAGE5O15320 804 aa17.94■□□□□ 0.46
RPL28-206ENST00000558752 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
RPL28-206ENST00000558752 SUPT20HL2P0C7V6 817 aa17.94■□□□□ 0.46
RPL28-206ENST00000558752 CYP2C18P33260 490 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms