RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ANKRD35Q8N283 1001 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 SRBD1Q8N5C6 995 aaKnown RBP14.52□□□□□ -0.09
LRRC28-206ENST00000558471 CLEC4DQ8WXI8 215 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 PIGSQ96S52 555 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 A1CFQ9NQ94 594 aaKnown RBP14.52□□□□□ -0.09
LRRC28-206ENST00000558471 PNMA2Q9UL42 364 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 CENPFP49454 3210 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 NFIBO00712 420 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 ZBTB5O15062 677 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-206ENST00000558471 IGHA2P01877 340 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 EVCP57679 992 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 FBXO11Q86XK2 927 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 HOMER1Q86YM7 354 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 TRMT44Q8IYL2 757 aaKnown RBP14.51□□□□□ -0.09
LRRC28-206ENST00000558471 PIBF1Q8WXW3 757 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 MAML3Q96JK9 1138 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 LZTS2Q9BRK4 669 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 FAM217BQ9NTX9 383 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-206ENST00000558471 PDRG1Q9NUG6 133 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 SLC5A4Q9NY91 659 aa14.51□□□□□ -0.09
LRRC28-206ENST00000558471 NAP1L2Q9ULW6 460 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-206ENST00000558471 DIS3Q9Y2L1 958 aaKnown RBP14.51□□□□□ -0.09
LRRC28-206ENST00000558471 PNMA6FA0A0J9YX94 578 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 GOLGA8BA8MQT2 603 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 CDC27P30260 824 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 UBXN2AP68543 259 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 RTN1Q16799 776 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 NSMFQ6X4W1 530 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 TMTC3Q6ZXV5 915 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 CCDC82Q8N4S0 544 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 LARP6Q9BRS8 491 aaKnown RBP14.5□□□□□ -0.09
LRRC28-206ENST00000558471 SPZ1Q9BXG8 430 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 AMNQ9BXJ7 453 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 UNC93B1Q9H1C4 597 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 CYP39A1Q9NYL5 469 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 MCM3APO60318 1980 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 LCTP09848 1927 aa14.5□□□□□ -0.09
LRRC28-206ENST00000558471 KIAA0100Q14667 2235 aaKnown RBP14.5□□□□□ -0.09
LRRC28-206ENST00000558471 ABCB11O95342 1321 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 CAPN15O75808 1086 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 CCL5P13501 91 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 CYP2C19P33261 490 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 RCAN1P53805 252 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 CNTN2Q02246 1040 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 CACNB2Q08289 660 aaPredicted RBP14.49□□□□□ -0.09
LRRC28-206ENST00000558471 MAP3K21Q5TCX8 1036 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 OLFML2BQ68BL8 750 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 FAM133AQ8N9E0 248 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 TBC1D5Q92609 795 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 FGD4Q96M96 766 aa14.49□□□□□ -0.09
LRRC28-206ENST00000558471 RBM28Q9NW13 759 aaKnown RBP14.49□□□□□ -0.09
LRRC28-206ENST00000558471 PFASO15067 1338 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 SOWAHBA6NEL2 793 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 POTEB2H3BUK9 544 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 PRKAR2AP13861 404 aaKnown RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 PDIA3P30101 505 aaKnown RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 ADD1P35611 737 aaKnown RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 BAATQ14032 418 aaPredicted RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 MFSD14CQ5VZR4 134 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 RRP36Q96EU6 259 aaKnown RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 PURBQ96QR8 312 aaKnown RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 TMEM106CQ9BVX2 250 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 C22orf23Q9BZE7 217 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 RNF208Q9H0X6 261 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 MRPL11Q9Y3B7 192 aaKnown RBP14.48□□□□□ -0.09
LRRC28-206ENST00000558471 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
LRRC28-206ENST00000558471 RPTORQ8N122 1335 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 hCG_1642624A0A1W2PR95 340 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 PTPDC1A2A3K4 754 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 POTEFA5A3E0 1075 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 NEK4P51957 841 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 SOX10P56693 466 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 CCT2P78371 535 aaKnown RBP14.47□□□□□ -0.09
LRRC28-206ENST00000558471 FUT2Q10981 343 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 PRAMEF19Q5SWL8 479 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 SLC30A10Q6XR72 485 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 RNF207Q6ZRF8 634 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 ZNF467Q7Z7K2 595 aaPredicted RBP14.47□□□□□ -0.09
LRRC28-206ENST00000558471 RGS22Q8NE09 1264 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 KIF2CQ99661 725 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 TINF2Q9BSI4 451 aa14.47□□□□□ -0.09
LRRC28-206ENST00000558471 HMX1Q9NP08 348 aaPredicted RBP14.47□□□□□ -0.09
LRRC28-206ENST00000558471 RBBP6Q7Z6E9 1792 aaKnown RBP14.47□□□□□ -0.09
LRRC28-206ENST00000558471 ASTN1O14525 1302 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 CNTNAP5Q8WYK1 1306 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 OPLAHO14841 1288 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 CALML3P27482 149 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 CCND3P30281 292 aaPredicted RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 RBM25P49756 843 aaKnown RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 AK2P54819 239 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 RPS6P62753 249 aaKnown RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 TRAF1Q13077 416 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 MCF2L2Q86YR7 1114 aa14.46□□□□□ -0.09
LRRC28-206ENST00000558471 TRPV1Q8NER1 839 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms