RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 NKX3-2P78367 333 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 SPC25Q9HBM1 224 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 CXXC1Q9P0U4 656 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-204ENST00000558376 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 TNFRSF10AO00220 468 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 FBXO40Q9UH90 709 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 NMIQ13287 307 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 AKNAD1Q5T1N1 836 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 HERVK_113Q902F9 699 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 APPBP2Q92624 585 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 KIF2CQ99661 725 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
RABGGTA-204ENST00000558376 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 UMODL1Q5DID0 1318 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 RNF113AO15541 343 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 GPAA1O43292 621 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 BMP3P12645 472 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 RBM25P49756 843 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 OAZ1P54368 228 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 CCDC85BQ15834 202 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 PSRC1Q6PGN9 363 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 NKX2-4Q9H2Z4 354 aa13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 YBX2Q9Y2T7 364 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-204ENST00000558376 ZNF536O15090 1300 aa13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 M0R2C6 588 aa13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 SGSM2O43147 1006 aa13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-204ENST00000558376 LCTP09848 1927 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 TMEM232C9JQI7 657 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 REC8O95072 547 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 TTLL1O95922 423 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 FGBP02675 491 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 COL9A1P20849 921 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 TDO2P48775 406 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 IFNL3Q8IZI9 196 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 NEDD1Q8NHV4 660 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 TRPV6Q9H1D0 765 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 PDGFCQ9NRA1 345 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 RAPGEFL1Q9UHV5 662 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 SMPD1P17405 629 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 IGFBP4P22692 258 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 CCL23P55773 120 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 SNAP25P60880 206 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 RAB30Q15771 203 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 OTOP2Q7RTS6 562 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 HIPK3Q9H422 1215 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 THEGQ9P2T0 379 aa13.16□□□□□ -0.3
RABGGTA-204ENST00000558376 APPP05067 770 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 RABGGTBP53611 331 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 TFAP4Q01664 338 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 PTH1RQ03431 593 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 FSCN1Q16658 493 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 NOC4LQ9BVI4 516 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms