RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 BTBD18B2RXH4 712 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TRIM66O15016 1216 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 N4BP3O15049 544 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 ACTN4O43707 911 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 KRT86O43790 486 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 MFAP3LO75121 409 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TNKSO95271 1327 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 ABCB11O95342 1321 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 LDHCP07864 332 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 HARSP12081 509 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 CYP7A1P22680 504 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 PHKA1P46020 1223 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 MNX1P50219 401 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 DNM2P50570 870 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 PSMD7P51665 324 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 GYS2P54840 703 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 INHBEP58166 350 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 PAK1Q13153 545 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 PSMD2Q13200 908 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SCARF1Q14162 830 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TSNAXIP1Q2TAA8 658 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 KIF4BQ2VIQ3 1234 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SBK1Q52WX2 424 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 RRP12Q5JTH9 1297 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TTC38Q5R3I4 469 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SEPT14Q6ZU15 432 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 XIRP1Q702N8 1843 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 RSRC2Q7L4I2 434 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 GET4Q7L5D6 327 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 APBB1IPQ7Z5R6 666 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SH3RF1Q7Z6J0 888 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 BCL9LQ86UU0 1499 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 DGKHQ86XP1 1220 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SLF2Q8IX21 1173 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 IQCF2Q8IXL9 164 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 STK11IPQ8N1F8 1099 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 GBP7Q8N8V2 638 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TC2NQ8N9U0 490 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 ATL2Q8NHH9 583 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 FAM76AQ8TAV0 307 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 LZICQ8WZA0 190 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 PIGBQ92521 554 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 FBXW7Q969H0 707 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SAAL1Q96ER3 474 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TRERF1Q96PN7 1200 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 PLEKHG4BQ96PX9 1271 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 MPHOSPH6Q99547 160 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 CARD6Q9BX69 1037 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 EDEM3Q9BZQ6 932 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 THAP9Q9H5L6 903 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 CABP5Q9NP86 173 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 FAM217BQ9NTX9 383 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TCP11L1Q9NUJ3 509 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC87Q9NVE4 849 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 ADD3Q9UEY8 706 aaKnown RBP6.12□□□□□ -1.43
GABPB1-207ENST00000558335 SERTAD1Q9UHV2 236 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 TSKSQ9UJT2 592 aa6.12□□□□□ -1.43
GABPB1-207ENST00000558335 RBM47A0AV96 593 aaKnown RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 SHTN1A0MZ66 631 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ANO9A1A5B4 782 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 VWA3AA6NCI4 1184 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 RANBP6O60518 1105 aaKnown RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 USO1O60763 962 aaKnown RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 BAG3O95817 575 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 SCG2P13521 617 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ATP1A3P13637 1013 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 PLCG2P16885 1265 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 PAX3P23760 479 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 GPTP24298 496 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 GNA11P29992 359 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 FLT3P36888 993 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 TRPC1P48995 793 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 RBM5P52756 815 aaKnown RBP eCLIP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 NLRP5P59047 1200 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 CDK17Q00537 523 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 TBC1D8BQ0IIM8 1120 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 DPYDQ12882 1025 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 RASGRF1Q13972 1273 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 SMC1AQ14683 1233 aaKnown RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ARID5BQ14865 1188 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 SEPT2Q15019 361 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 SF3B3Q15393 1217 aaKnown RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 SEC23AQ15436 765 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 E2F4Q16254 413 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 TBC1D25Q3MII6 688 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 COBLL1Q53SF7 1204 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 FIGNQ5HY92 759 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 NAIF1Q69YI7 327 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 CC2D1AQ6P1N0 951 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 WDR93Q6P2C0 686 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 DTHD1Q6ZMT9 781 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC84Q86UT8 332 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 MFN1Q8IWA4 741 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 PROM2Q8N271 834 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 DAGLBQ8NCG7 672 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 MSANTD4Q8NCY6 345 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 OR8K1Q8NGG5 319 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 FAM71BQ8TC56 605 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 CABLES1Q8TDN4 633 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms