RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 USP17L21D6R901 530 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 KRT40Q6A162 431 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 INTS9Q9NV88 658 aaKnown RBP15.26■□□□□ 0.03
SPG11-210ENST00000558319 NUB1Q9Y5A7 615 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 RNF217Q8TC41 542 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 STK25O00506 426 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 SH3BGRP55822 239 aaPredicted RBP15.26■□□□□ 0.03
SPG11-210ENST00000558319 MORC3Q14149 939 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 HP1BP3Q5SSJ5 553 aaPredicted RBP15.26■□□□□ 0.03
SPG11-210ENST00000558319 CARD14Q9BXL6 1004 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 DISC1Q9NRI5 854 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 PPWD1Q96BP3 646 aaKnown RBP15.26■□□□□ 0.03
SPG11-210ENST00000558319 ALKBH8Q96BT7 664 aaKnown RBP15.26■□□□□ 0.03
SPG11-210ENST00000558319 JRKLQ9Y4A0 524 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 ESYT2A0FGR8 921 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 SART1O43290 800 aaKnown RBP15.26■□□□□ 0.03
SPG11-210ENST00000558319 RNF8O76064 485 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 SUN1O94901 812 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 MED4Q9NPJ6 270 aa15.26■□□□□ 0.03
SPG11-210ENST00000558319 FLT4P35916 1363 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
SPG11-210ENST00000558319 PPARAQ07869 468 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 C2orf54Q08AI8 447 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 SDCCAG3Q96C92 435 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 GYS2P54840 703 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 SEPT8Q92599 483 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 TMOD1P28289 359 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 SLC16A2P36021 539 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 SNX1Q13596 522 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 GABPB2Q8TAK5 448 aaPredicted RBP15.25■□□□□ 0.03
SPG11-210ENST00000558319 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
SPG11-210ENST00000558319 A0A1W2PP64 1363 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 STAM2O75886 525 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 GDAP1Q8TB36 358 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 RASGRP4Q8TDF6 673 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 CACYBPQ9HB71 228 aaKnown RBP15.25■□□□□ 0.03
SPG11-210ENST00000558319 SCOCQ9UIL1 159 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 E7EWF7 191 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 AKT3Q9Y243 479 aa15.25■□□□□ 0.03
SPG11-210ENST00000558319 GDF11O95390 407 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 PDCD2Q16342 344 aaPredicted RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 HSP90AA5PQ58FG0 334 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 ZBTB33Q86T24 672 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 APPBP2Q92624 585 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 RIC8AQ9NPQ8 531 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 PRDM5Q9NQX1 630 aaPredicted RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 YTHDC2Q9H6S0 1430 aaKnown RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 PKP1Q13835 747 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 OR8K1Q8NGG5 319 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 SEPT9Q9UHD8 586 aaPredicted RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 TRIM37O94972 964 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 EEF1B2P24534 225 aaKnown RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 MARK3P27448 753 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 ARHGAP4P98171 946 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 PCIF1Q9H4Z3 704 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 OLA1Q9NTK5 396 aaKnown RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 MAD1L1Q9Y6D9 718 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 IP6K1Q92551 441 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 ZC4H2Q9NQZ6 224 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 RAB20Q9NX57 234 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 TSR3Q9UJK0 312 aaKnown RBP15.24■□□□□ 0.03
SPG11-210ENST00000558319 PFKFB1P16118 471 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 THEGQ9P2T0 379 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 NSD2O96028 1365 aa15.24■□□□□ 0.03
SPG11-210ENST00000558319 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 LRRC24Q50LG9 513 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 SLC35F6Q8N357 371 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 CEP70Q8NHQ1 597 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 MEIS1O00470 390 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 ATF2P15336 505 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 DYNLT1P63172 113 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 SMAD1Q15797 465 aaKnown RBP15.23■□□□□ 0.03
SPG11-210ENST00000558319 NUDCD3Q8IVD9 361 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 FANCLQ9NW38 375 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 BAG5Q9UL15 447 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 ZBTB24O43167 697 aaPredicted RBP15.23■□□□□ 0.03
SPG11-210ENST00000558319 GUCY2CP25092 1073 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 GAS2L3Q86XJ1 694 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 MAIP1Q8WWC4 291 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 hCG_2014768A0A024R1R8 64 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 PALM3A6NDB9 673 aaPredicted RBP15.23■□□□□ 0.03
SPG11-210ENST00000558319 KRT10P13645 584 aa15.23■□□□□ 0.03
SPG11-210ENST00000558319 ETF1P62495 437 aaKnown RBP15.23■□□□□ 0.03
SPG11-210ENST00000558319 CYTH2Q99418 400 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms