RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
TPM1-211ENST00000558314 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
TPM1-211ENST00000558314 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
TPM1-211ENST00000558314 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
TPM1-211ENST00000558314 PTPDC1A2A3K4 754 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 PLA2G6O60733 806 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 ICAM1P05362 532 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
TPM1-211ENST00000558314 GJA9P57773 515 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 FPGSQ05932 587 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 FAAP100Q0VG06 881 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 PLEKHM2Q8IWE5 1019 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
TPM1-211ENST00000558314 A0A0U1RQG5 324 aaPredicted RBP18.28■□□□□ 0.52
TPM1-211ENST00000558314 ZNF213O14771 459 aa18.28■□□□□ 0.52
TPM1-211ENST00000558314 DYNC1LI2O43237 492 aaPredicted RBP18.28■□□□□ 0.52
TPM1-211ENST00000558314 EPHB4P54760 987 aa18.28■□□□□ 0.52
TPM1-211ENST00000558314 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
TPM1-211ENST00000558314 CCSAPQ6IQ19 270 aaPredicted RBP18.28■□□□□ 0.52
TPM1-211ENST00000558314 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
TPM1-211ENST00000558314 STXBP5LQ9Y2K9 1186 aa18.28■□□□□ 0.52
TPM1-211ENST00000558314 NEDD4P46934 1319 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 NFIBO00712 420 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 KIAA0355O15063 1070 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 FGRP09769 529 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 GOLGA8HP0CJ92 632 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 CALML3P27482 149 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 CST5P28325 142 aaPredicted RBP18.27■□□□□ 0.52
TPM1-211ENST00000558314 NUCB1Q02818 461 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 AAMPQ13685 434 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 CXCL17Q6UXB2 119 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 KIAA1211Q6ZU35 1233 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 ESR2Q92731 530 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 PPP1R12CQ9BZL4 782 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
TPM1-211ENST00000558314 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
TPM1-211ENST00000558314 RANBP17Q9H2T7 1088 aaKnown RBP18.27■□□□□ 0.52
TPM1-211ENST00000558314 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
TPM1-211ENST00000558314 ASTN1O14525 1302 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 TLR3O15455 904 aaKnown RBP18.26■□□□□ 0.51
TPM1-211ENST00000558314 PDHBP11177 359 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 SMPD1P17405 629 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 ANKRD33Q7Z3H0 272 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 TOX2Q96NM4 488 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 GUCD1Q96NT3 240 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
TPM1-211ENST00000558314 ELP1O95163 1332 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 ZMYM6O95789 1325 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 MROH7Q68CQ1 1323 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 ARVCFO00192 962 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 DLL1O00548 723 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 NOVP48745 357 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 FSCN1Q16658 493 aaKnown RBP18.25■□□□□ 0.51
TPM1-211ENST00000558314 USH1GQ495M9 461 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 TMEM63BQ5T3F8 832 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 SLC30A10Q6XR72 485 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 UBA5Q9GZZ9 404 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 CPVLQ9H3G5 476 aa18.25■□□□□ 0.51
TPM1-211ENST00000558314 ZEB2O60315 1214 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 KDM4AO75164 1064 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 TIMP1P01033 207 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 ZNF543Q08ER8 600 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 RNF207Q6ZRF8 634 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 KAT14Q9H8E8 782 aa18.24■□□□□ 0.51
TPM1-211ENST00000558314 ADD3Q9UEY8 706 aaKnown RBP18.24■□□□□ 0.51
TPM1-211ENST00000558314 B4E1Z4 1266 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 CTAGE5O15320 804 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 DHX16O60231 1041 aaKnown RBP18.23■□□□□ 0.51
TPM1-211ENST00000558314 ALDH5A1P51649 535 aaPredicted RBP18.23■□□□□ 0.51
TPM1-211ENST00000558314 PSMC6P62333 389 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
TPM1-211ENST00000558314 IQSEC1Q6DN90 963 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 FAM109BQ6ICB4 259 aaPredicted RBP18.23■□□□□ 0.51
TPM1-211ENST00000558314 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 TICAM2Q86XR7 235 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 TTC14Q96N46 770 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 VTA1Q9NP79 307 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 TBX21Q9UL17 535 aa18.23■□□□□ 0.51
TPM1-211ENST00000558314 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
TPM1-211ENST00000558314 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
TPM1-211ENST00000558314 HIP1O00291 1037 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 ACRP10323 421 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 PCP11498 1178 aaKnown RBP18.22■□□□□ 0.51
TPM1-211ENST00000558314 CDK7P50613 346 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 SMAD3P84022 425 aaKnown RBP18.22■□□□□ 0.51
TPM1-211ENST00000558314 PDE4DQ08499 809 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 IQCA1Q86XH1 822 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 CDX2Q99626 313 aaPredicted RBP18.22■□□□□ 0.51
TPM1-211ENST00000558314 WDR11Q9BZH6 1224 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 SEMA6BQ9H3T3 888 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
TPM1-211ENST00000558314 MYL3P08590 195 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 CSF2RAP15509 400 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 CYP2C18P33260 490 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms