RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 FAM86C2PA6NEL3 165 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 RPL10P27635 214 aaKnown RBP5.52□□□□□ -1.53
LRRC28-205ENST00000558248 GTF2F1P35269 517 aaKnown RBP eCLIP5.52□□□□□ -1.53
LRRC28-205ENST00000558248 EIF6P56537 245 aaKnown RBP5.52□□□□□ -1.53
LRRC28-205ENST00000558248 MLANAQ16655 118 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 CCDC144BQ3MJ40 725 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 FYB2Q5VWT5 728 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 C9orf131Q5VYM1 1079 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 TMC3Q7Z5M5 1100 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 KSR1Q8IVT5 923 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 TMEM192Q8IY95 271 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 LILRA2Q8N149 483 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 RBBP8NLQ8NC74 664 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-205ENST00000558248 OR6P1Q8NGX9 317 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 MORC4Q8TE76 937 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 CPLX3Q8WVH0 158 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 DSCC1Q9BVC3 393 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 CHST7Q9NS84 486 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 GINM1Q9NU53 330 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 PRR13Q9NZ81 148 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 TCFL5Q9UL49 500 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 SLC12A7Q9Y666 1083 aa5.52□□□□□ -1.53
LRRC28-205ENST00000558248 PLA2R1Q13018 1463 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 SETD1AO15047 1707 aaKnown RBP5.51□□□□□ -1.53
LRRC28-205ENST00000558248 CFAP74Q9C0B2 1584 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 PLCH2O75038 1416 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 NPATQ14207 1427 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 PRAMEF1O95521 474 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 HPXP02790 462 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 SYPP08247 313 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 ZGLP1P0C6A0 271 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 SOX9P48436 509 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 PMS1P54277 932 aaKnown RBP5.51□□□□□ -1.53
LRRC28-205ENST00000558248 TEKQ02763 1124 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 AUHQ13825 339 aaKnown RBP5.51□□□□□ -1.53
LRRC28-205ENST00000558248 SOGA3Q5TF21 947 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 EFCAB2Q5VUJ9 269 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 CCDC81Q6ZN84 652 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 WAPLQ7Z5K2 1190 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 LINC00116Q8NCU8 138 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 RASGRP4Q8TDF6 673 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 TCTN2Q96GX1 697 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 LIN37Q96GY3 246 aaPredicted RBP5.51□□□□□ -1.53
LRRC28-205ENST00000558248 PRDM14Q9GZV8 571 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 ZMYM5Q9UJ78 669 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 INPP5FQ9Y2H2 1132 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 CPS1P31327 1500 aa5.51□□□□□ -1.53
LRRC28-205ENST00000558248 ZNF503-AS2A6NEH8 195 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 HMGB1P1B2RPK0 211 aaPredicted RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 RBAK-RBAKDNI3L0D1 243 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 GJA8P48165 433 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 SNW1Q13573 536 aaKnown RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 NOL9Q5SY16 702 aaKnown RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 CWF19L1Q69YN2 538 aaKnown RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 TMED8Q6PL24 325 aaPredicted RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 LSRQ86X29 649 aaPredicted RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 C7orf61Q8IZ16 206 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 FAM84AQ96KN4 292 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 SRRTQ9BXP5 876 aaKnown RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 FOXP3Q9BZS1 431 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 GFOD1Q9NXC2 390 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 NOP58Q9Y2X3 529 aaKnown RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 NUP153P49790 1475 aaKnown RBP5.5□□□□□ -1.53
LRRC28-205ENST00000558248 CTTNBP2Q8WZ74 1663 aa5.5□□□□□ -1.53
LRRC28-205ENST00000558248 CNTLNQ9NXG0 1405 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 RAPGEF6Q8TEU7 1601 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 MEIS1O00470 390 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 FKTNO75072 461 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 ACRP10323 421 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 SNX17Q15036 470 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 NR0B2Q15466 257 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 SLC14A2Q15849 920 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 UNC5AQ6ZN44 842 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 SEC16BQ96JE7 1060 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 PPP1R16BQ96T49 567 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 SLC6A17Q9H1V8 727 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 EPB41L4BQ9H329 900 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 ZSWIM4Q9H7M6 989 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 CAPN10Q9HC96 672 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 GPR160Q9UJ42 338 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 STRIP2Q9ULQ0 834 aa5.49□□□□□ -1.53
LRRC28-205ENST00000558248 AGLP35573 1532 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 GSNP06396 782 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 C8AP07357 584 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 BMP8BP34820 402 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 NASPP49321 788 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 ERVFC1P60507 584 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 TCEAL1Q15170 157 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 ZNF648Q5T619 568 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 TDRD10Q5VZ19 366 aaKnown RBP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 VPS37DQ86XT2 251 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 NLGN1Q8N2Q7 840 aa5.48□□□□□ -1.53
LRRC28-205ENST00000558248 C19orf47Q8N9M1 422 aaKnown RBP5.48□□□□□ -1.53
LRRC28-205ENST00000558248 DIRC2Q96SL1 478 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms